Agrobacterium vitis VAT03-9: RvVAT039_27270
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Entry
RvVAT039_27270 CDS
T08809
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
avv
Agrobacterium vitis VAT03-9
Pathway
avv00521
Streptomycin biosynthesis
avv00523
Polyketide sugar unit biosynthesis
avv00541
O-Antigen nucleotide sugar biosynthesis
avv01100
Metabolic pathways
avv01110
Biosynthesis of secondary metabolites
avv01250
Biosynthesis of nucleotide sugars
Module
avv_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
avv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RvVAT039_27270
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RvVAT039_27270
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RvVAT039_27270
Enzymes [BR:
avv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RvVAT039_27270
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BCH65511
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All DBs
Position
1:2972219..2972782
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AA seq
187 aa
AA seq
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MQFEETKLSGVFLITPKRFGDARGYFMETFRASLFESEVGSFTFVQDNKSFSAEVGTVRG
LHFQLNPRAQGKLVSCAAGALLDVAVDIRQGSPTYGQMVKAELTAENGCQLWVPPGFAHG
FCTLQPNTVISYKVTDYYSPDHDRGLLWNDPALAIDWPVTEDNAILSEKDKKQPKLSELE
TNFVYRP
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgaagaaacgaagctgtcgggtgttttcctgatcactccaaagcggtttggg
gacgcgcggggctatttcatggaaaccttccgtgccagcctgtttgaaagcgaagtggga
tctttcaccttcgttcaggacaacaagtcgttttcggccgaggtcggcacggtgcgcggc
ctgcatttccagttgaacccgagggcgcagggcaagctcgtgtcctgtgcggctggcgct
ttgctggatgtcgctgtcgatattcgccagggttcgccgacctacggccagatggtcaaa
gccgaactgactgccgaaaacggctgccagctttgggtgccgccgggttttgcccatggc
ttctgcactttgcagcccaataccgtgatcagctacaaggtgacggattattacagcccg
gatcatgaccggggcctgttgtggaacgatccggctctggcgatcgactggccggtgacg
gaagacaacgccatcctgtctgagaaggacaagaagcagccgaaactgagcgagcttgag
acgaatttcgtctatcggccttaa
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