Anabaena sp. WA102: AA650_09765
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Entry
AA650_09765 CDS
T04059
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
awa
Anabaena sp. WA102
Pathway
awa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AA650_09765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awa03019
]
AA650_09765
03009 Ribosome biogenesis [BR:
awa03009
]
AA650_09765
Enzymes [BR:
awa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
AA650_09765
Messenger RNA biogenesis [BR:
awa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AA650_09765
Ribosome biogenesis [BR:
awa03009
]
Prokaryotic type
rRNA processing factors
AA650_09765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
ALB40722
UniProt:
A0A0K2LY63
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All DBs
Position
2248817..2250985
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AA seq
722 aa
AA seq
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MPKQIIIAEQYQIAAVFSEDQIQELVVATGHHQIGDIYLGVVENVLPGIDAAFVNIGDPE
RNGFIHVTDLGPLRLKRSAAAITELLTPQQKTLVQVMKEPTGSKGPRLTGNITLPGRYVV
LMPYGRGVNLSRRIKSESERNRLRALAILVKPAGMGLLVRTEAEGKPEEAIIEDLEVLQK
QWEIVQQEAVTSRAPALLNRDDDFIQRVLRDMYGSDVNRIVVDSSTGLKRVKQYLQNWSG
GQTPQGLLIDHHRDRSPILEYFRINAAVREALRPRVDLPSGGYVIIQPTEALTVIDVNSG
SFTRSATARETVLWTNCEAAAEIARQLRLRNIAGVIVVDFIDMESRRDQMQVLEHFNKAL
KADKARPQIAQLTELGLVELTRKRQGQNIYELFGETCPTCGGLGHTVRLPGELENRLPIP
AADIPERFVPMPQRESRPPAPTTRIPDIGSVPQVTPKDVYDGFGDGFETEPEFSSLHLIN
HPSYQELNDKRRTRTRRSRISVNGGNGKDESRLPSNPLAFVNDPDLDLEEPELPIPEISP
PTINKSGWTERPERTKVKLDPIKVEPPEVITVEMSAKEQDTYAEMGISPLLKLDREGKNP
RSVIINVVQPGQSPIEESEVVPEPIVTEKTLPEVVAIKLPTSKFEIEEDSSFPPLVIFPE
LTEILGEKATKAEGKIEPEKETKVEEKTEIEKEIESDSNSSSIPNRRRRRRSSALDTDGF
GL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacaaattatcatcgcggagcagtatcaaattgctgctgtattttcagaagat
caaatacaagaactcgttgtagctacgggtcatcaccaaattggtgatatctatctgggt
gtagtagaaaatgtattacctgggatagatgcggcttttgtcaatatcggcgatccagaa
cgcaacggatttattcacgtcactgatttaggtccattaaggctgaaacgtagtgcagca
gcaatcacagaactgttgacaccacaacaaaaaaccttagtgcaggtgatgaaagagcca
accggatcaaaaggtcccaggctcacaggtaatatcacattacctggacgttatgtagtg
ttaatgccctatggacgaggggtaaatttatcgagacggattaaaagcgaaagtgaacgt
aaccgcctcagagctttggctattttagtgaaaccagcagggatggggttactggtacgc
acagaagcagaaggtaagccagaagaagccattattgaagatttggaagtgctgcaaaag
cagtgggaaattgtccagcaagaagcagtgacttcccgtgcgccggctctactgaatcgt
gatgatgactttattcagcgcgttcttagagatatgtatggtagtgatgtgaatcgcata
gttgttgattccagcactggtttaaaacgagtgaagcagtatttacaaaactggagtggt
ggacaaacaccccaaggattgttaattgatcatcaccgcgatcgctcacccattttagaa
tatttccgcatcaatgccgctgtccgtgaagccctcagaccgagggtagatttaccatca
ggcggttatgtgatcatccaaccaacggaagctttaacagtcatagacgtgaactccggt
tcattcacccgttcggcaactgctagagaaacagtgctgtggacaaactgcgaagcagca
gcggaaattgctcgtcagttacggttgcggaacattgcaggtgtgattgtggttgatttc
attgatatggaatcccgacgtgatcaaatgcaagttttagaacactttaacaaagctctt
aaagctgataaagcccgtccccaaattgcccaactgactgaactaggtttggtggaactt
actcgtaagcgtcaaggtcaaaacatttatgaattgtttggcgaaacttgtcctacttgt
ggcggcttaggacataccgtcagattacctggagaactagaaaaccgtctgcctatcccg
gctgcggacatcccagagcgatttgtacccatgcctcaaagggaatctcgtccacctgca
cccactactcgcatacctgatatcggtagtgtgccacaagtgacaccaaaagatgtctat
gatggctttggtgatggatttgaaactgaaccggaatttagttctctgcatctgatcaat
catcctagttaccaagaattaaatgataagcgtcgtacccggacccgccgtagccgcatt
agtgtgaatggtggtaacggtaaggatgaatcccgcttacctagtaatcctctagctttt
gttaatgatccagatttagacttagaagaacctgaattaccaataccagaaatctctccc
ccaactattaataaatcaggttggacggaaagaccagaacggacaaaggtaaaattagac
ccgattaaggtagaaccaccagaggtgattacggtggaaatgtcagcaaaggaacaggat
acttatgctgaaatgggaatttctcctttactcaagttagatcgggagggaaaaaatcct
agatcggtgattatcaatgttgtgcaaccaggacaatcacctattgaagaatctgaagtt
gttcctgaaccaattgttactgaaaaaacacttcctgaagttgtcgctattaaactaccg
acatcaaaatttgagatagaagaagattcatcctttccaccattagtaatatttccagaa
ttgacagaaattcttggagaaaaagcaactaaagctgaaggaaaaatagaacctgagaaa
gaaactaaagttgaagaaaaaacggaaattgaaaaagaaatagaatctgatagtaatagt
agttctattcctaatcgtcgtcgtcgtcgtcgttcatcagccttagatacagatggtttt
ggactgtga
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