Acinetobacter wuhouensis: BEN71_02665
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Entry
BEN71_02665 CDS
T05823
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
awu
Acinetobacter wuhouensis
Pathway
awu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
awu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BEN71_02665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
awu03019
]
BEN71_02665
03009 Ribosome biogenesis [BR:
awu03009
]
BEN71_02665
Enzymes [BR:
awu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BEN71_02665
Messenger RNA biogenesis [BR:
awu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BEN71_02665
Ribosome biogenesis [BR:
awu03009
]
Prokaryotic type
rRNA processing factors
BEN71_02665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AXQ21061
UniProt:
A0A385C055
LinkDB
All DBs
Position
complement(425701..429111)
Genome browser
AA seq
1136 aa
AA seq
DB search
MKRMLINATHAEEVRVALITGHRLYDFDLENRTREQKKANIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANTYYKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTYISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEMLASLNTPRGMSVIVRTAGIGRSQEELQL
DLQHLLDLWAQIQGTANSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPNQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGHDVEETALSTNLEAAEEISRQLRLRDIGGLVVIDFIDMTKERNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALKERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSNVRVTVLPHPHLETPHY
EISYNPEGFAPTSYERTEATRSSEKELGYESSEWHLEEEQAHQHTAAPVQTQNNKQGKKQ
QSQPQAQQQQRQQAVQAQVAQPSSSPCAWLENLFVQKQAATVDQSRTANNAAASIEQMVN
GGAVSRGQFGQVNQAPSAPTIEARVIPETNAYLSHAPAQKQEPREYEKHVEREDKPQRNN
KNKNRNKHKEQRDQSNDQHQVIEEVVQVTRQEQRQEQRQDNRQEQRDQRRQQKQQRPQHE
QHADANNNAEQAVPRRDRNQQQRPQRPNRHRDHSVFNGEQQPAQVNTPAVETQQAAQNQQ
PKVEFVDAPQQAQLTTALVVNIDQAQSEIVALTPPQQAPAPAKQQKHRREAKAEVAVEAP
TATPVANTTPVEQAPVVEVQAQQPVQRASNDPRQKRRQQREAAQAKAATPKLNPSQVPTL
GQYTVRSLITHVYGDDCAVLIEQFGLIPTFNRALAKFTEEYAATLTVVETSEPAVKQPVT
RDVAVTKAAPEAEPAEVLDLTPPKPENDRRVANDPRERRRLAKQAAAQAKQEHQAEVVKT
AESDVIEAAPVQAEATTETIATETEATTPVEAVETEAAPVVEEAKVEVSVETDAVVDTTK
EAEAEKPQQSLALETAETVKDEATQQAETVATDEKPARPRRPRGRPPKKATPPTTE
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgatcaatgcaacacatgccgaagaagttcgcgttgcactcatcact
ggtcaccgtctttacgatttcgacttagaaaatcgtacacgtgagcaaaagaaagccaat
atttataaaggtcatgtcactcgcgtagagccttctttagaagctgtatttgtagaatat
ggtgcaggtcgtcaaggcttcttgtcgatgcgcgaaattgccaatacttattacaaagca
gaccctcgccaaacttcaaatattcgtgaattgatcactgaaggcacagaacttcttgtt
caagttgaaaaagaagaacgtggcaataaaggtgctgccctttctacttatatttcactt
gcaggtcgttatttggtacttatgccaaacaaccctaaaggtggcggtatcagtcgtcaa
atttcaggttcagttcgtgaagagttgaaagaaatgttggcgtctttaaatacccctcgt
gggatgagcgtcatcgttcgtaccgcaggtattggtcgttcacaagaagaattacaactc
gacttacaacatttattagacctttgggcacaaatccaagggactgcaaattctggtcca
tcaccaatgttggtacatcaagaagcaggtgtagtgacacgtgcgattcgtgattatcta
cgtgatgatgttgcagaaattttaattgattctgagcaagcctataacgaagcatataac
tttgttaaagcggtaatgccaaaccaactcgacaaactcaaaacttatactttaaatgaa
ccattatttgctcattttggtatcgaaagccaaatccaaactgcttatgaacgtgaagta
aaacttccttccggtggttctattgtcatcgaccaaactgaagcattggtttctattgat
attaactctgcgaaatctacccgtggtcatgatgttgaagaaacagcattaagtactaac
ttagaagcagctgaagaaatttctcgtcaattgcgtttacgtgatattggcggtttagtc
gtgatcgactttatcgacatgaccaaagaacgcaaccaacgtatggttgaagcgaaactt
cgtgaagcgacgcaaagcgatcgtgcacgtatccaatttggtcaattatcacgttttggt
ttaatggaaatgagccgtcaacgcttgcgtccatcacttgaagaagcaactggttatgtc
tgcccgcgctgtcatggcacaggtatggtacgtgacttacgttcgctttctctttcaatc
atgcgtaaagttgaagagattgcactcaaagaacgtcatggtgaagttcaagttgaagtg
cctgtagagattgcagcattcttattgaatgaaaagcgtcacagtcttgtttacttagaa
caaacctcaaatgtacgtgtgactgtattgccacatccacatttagaaacaccacattac
gaaatttcgtataaccctgaaggctttgcgccaacaagctatgaacgtactgaagcaact
cgttcaagcgaaaaagaattgggttatgagtcatctgagtggcatttagaagaagagcaa
gcacatcagcacactgctgcacctgttcaaactcaaaacaataagcaaggcaaaaaacaa
caaagccaaccacaagctcagcaacagcaaagacaacaagctgttcaagctcaagttgcg
caaccatcatcaagcccatgcgcttggttagaaaacttgtttgttcaaaaacaagcagca
actgtagatcagtcacgtactgcgaataatgcagcagcttctattgaacaaatggtcaat
ggtggtgcggtaagccgtggtcaatttggtcaagtcaatcaagcgccttctgcaccaacg
attgaagcacgtgttatacctgaaaccaatgcttatctttcacacgcgcctgctcaaaag
caagaacctcgtgagtatgaaaagcatgttgaacgtgaggacaaacctcaacgtaacaac
aaaaacaaaaatcgcaataagcacaaagagcaacgcgatcaatcaaatgatcaacatcag
gtgattgaagaagttgttcaggtgactcgtcaggaacaacgccaagagcagcgtcaggac
aatcgccaagaacaacgtgatcaacgtcgtcagcaaaaacaacaacgtcctcagcatgaa
caacatgcagatgcgaacaataatgctgaacaagctgttccacgtcgtgaccgcaatcaa
caacagcgtccacaacgaccaaaccgtcatcgtgaccacagcgtgtttaatggtgagcaa
caacctgctcaagtgaatacacctgctgttgaaacacaacaagcggctcaaaatcaacaa
cctaaagttgaattcgtcgatgcacctcagcaggcgcaattaactacagctttggttgta
aatattgatcaagcgcaaagtgaaattgtggcattaacaccaccacaacaagcacctgca
cctgcgaagcaacaaaagcatcgtcgtgaagctaaagctgaagttgccgttgaagcacca
actgctacaccagtagcaaatacaacacctgtagagcaagcacctgttgtagaagttcaa
gctcaacaacctgttcaacgtgcgagtaatgacccacgtcaaaagcgccgtcaacaacgt
gaagccgctcaagccaaagctgccacaccaaaacttaatccgtctcaagtaccgacctta
ggtcagtatactgtacgtagcttgattactcatgtttatggtgatgattgtgctgtattg
attgaacagtttggattaatcccaacgttcaaccgtgcgttggcgaagttcacagaagaa
tatgctgcaacgctcactgttgtagaaacttctgaacctgcggttaaacaaccagtaaca
cgtgatgttgctgtgactaaagctgcacctgaagccgagcctgcggaagtgttagaccta
acaccaccaaagccagaaaatgaccgtcgtgtagccaatgatccacgtgaacgtcgtcgt
ttagccaaacaagcggctgctcaagcaaagcaagagcatcaagctgaagttgtgaaaaca
gctgaatctgatgttattgaagcagcacctgttcaagctgaagcaacaactgaaactatc
gcaactgagactgaagcaaccacaccagttgaagcagtagaaacagaagctgcaccagtg
gttgaagaagcaaaagttgaagtttcagtagaaactgatgctgttgttgatacaacaaaa
gaagccgaagctgaaaaaccacagcaatcgcttgcattggaaacagctgaaactgtgaaa
gatgaagcaacgcaacaagctgagactgttgcgacagatgaaaaacctgctcgtccacgt
cgcccacgtggtcgtccacccaaaaaagcaacaccaccaacaactgaataa
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