Bifidobacterium breve JCM 7019: B7019_1903
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Entry
B7019_1903 CDS
T03121
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bbrc
Bifidobacterium breve JCM 7019
Pathway
bbrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B7019_1903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbrc03019
]
B7019_1903
03009 Ribosome biogenesis [BR:
bbrc03009
]
B7019_1903
Enzymes [BR:
bbrc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B7019_1903
Messenger RNA biogenesis [BR:
bbrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B7019_1903
Ribosome biogenesis [BR:
bbrc03009
]
Prokaryotic type
rRNA processing factors
B7019_1903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AHJ20067
UniProt:
W6FBB8
LinkDB
All DBs
Position
complement(2091102..2094152)
Genome browser
AA seq
1016 aa
AA seq
DB search
MPTENREGFVGDETDNSTVSNTESQASGASEPNAEASQPTRRRRGGRRVVRGTGAAGASL
ELQVQEHAAPLFEAPALPDADASASAETTDNNASDDEKHPARRTRSRRSADNADYEDRPT
RRRAVADDDDEPRPVRRRRTVSDDLEEDDERPSRRRRAASDDFDEDSDRPVRRRRSVIDD
LEDDDAPRSSRRRTAVDDSDEDGDRPVRRRRSTTNDRDDEPRSARRTRSRRSSEDAREEN
PDERVLDVIDALPAGPESARRGKPMTSLLFQEPVLPDIRRDDRDDEEDDGAQRSRSSRRA
RAYEDEADYEERPSRSRRSNRSDHGDHDDRDDRDSRNNRRRNETQDDFDADDQSDSRRSH
RSRRLNAQERRAAAEVEQIEEDLELDDITYSPIAEEENDEESDSTRTRSRRRRRRGSRNE
SGASNNDSESSENNGDDSRRRRDDRDERDRDDDEEQTVTRRRRRRRGGKNAESGDEQDDQ
QLTRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQSQLMEQDFLARRENVDRLM
VVREKEHHTQISVVEDNILVEHYVSDIQEVQTVGNIYLGRVQNVLPSMEAAFVDIGQARN
GVLYAGEVNWDAARLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLV
LVPSGGMTGVSRKLSERERSRLKGIVSKIAPKDMGVIIRTAAEGASEEAIVKDLESLVRQ
WERINAKREEFWHGKRPKLLQGEPDVAIRVVRDIFNDDFGKLIVEGDKVYDRIEEYLDTM
APDLKDKLEKWDPAEHEGKDVFDKWQIDSQLRKGMERQVYLPSGGSIVIDRTEAMTTIDV
NTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYVDMVMPANRDLVLRRL
VECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCKGRGFILHDQPTVSAD
YDDPYALRGGDPFVKTNKHGRGTAPAPEPAGSSADVKAKLAQIAAAAVAANNTEEE
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
gtgcccactgagaaccgtgaaggtttcgtcggtgacgaaaccgataactcaaccgtatcc
aataccgaatcacaggcttcgggagcttccgagccgaacgccgaagcatcgcagccgact
cgccgccgtcgcggtggccgtcgtgtagtgcgtggcaccggtgctgccggcgcatccctt
gagctgcaagtccaggaacacgccgccccgctgttcgaggcacccgctttgcctgatgcc
gatgcgtccgcttccgccgaaactaccgacaataacgcctccgatgatgaaaagcacccg
gcgcgccgcacccgtagccgccgctctgccgataatgccgattatgaggaccgtccgact
cggcgtcgtgctgtggctgatgacgatgatgagccgcgcccggtgcgccgtcgccgtacg
gtgtctgatgatctcgaggaagacgatgagcgtccatcgcgccgtcgccgcgccgcatcc
gatgattttgatgaggatagcgatcgtccggtgcgtcgccgtcgctctgtgattgacgat
ctcgaagatgatgatgcgccgcgttcatctcgccgccgtactgcggtcgacgactccgat
gaggatggcgatcgtccggtgcgtcgccgtcgttccactacgaatgaccgcgatgacgag
ccccgctcggcccgtcgtactcgcagtcgccgttcttcggaagacgcgcgcgaagaaaac
cccgatgagcgcgtgctggatgtgattgatgcgctgcctgcagggcctgaatccgcccgt
cgtggcaagccgatgacttccctgctgttccaagagccggtgctcccggacattcgacgt
gatgatcgtgatgatgaggaagatgatggcgcgcagcgttcccgctcttctcgtcgcgcc
cgcgcctatgaggatgaggccgattacgaggagcgcccgtctcgttcccgacggtcgaac
cgcagcgatcacggcgatcatgatgaccgcgatgaccgcgacagccgcaataatcgtcgc
cgtaatgagactcaggatgatttcgacgctgatgaccagtccgattcccgccgttctcac
cgttcccgccgcctgaacgcccaggagcgccgtgctgccgccgaagtcgagcagattgag
gaagacctcgagctggatgacattacgtactcgccgattgctgaagaggagaacgacgaa
gagtccgactccacccgcacccgttcccgccgtcgccgtcgccgtggctcccgcaacgag
tccggtgcttccaacaacgacagcgagtcctccgagaacaatggtgacgattcccgtcgc
cgtcgcgatgatcgcgatgagcgcgaccgtgatgatgacgaggagcagaccgttacccgc
cgtcgccgtcgccgccgcggaggcaagaatgccgagagcggtgatgagcaggacgatcag
cagctgactcgccgctcccgtaagcagcagtacatcgatgagatcaccgatgtggaaggc
tccacccgtcttgaggccaagaaacagcgacgccgtgacaatcgtcgtgagcgtagccgc
cagagccagctcatggagcaggatttcctcgcacgccgtgagaacgtcgatcgcctcatg
gtggtgcgcgagaaggaacatcacacccagatttccgtggtggaagacaacatcctggtc
gagcattacgtctccgacatccaggaagtgcagaccgtgggcaacatctacctcggccgt
gtacagaacgtgctgcccagcatggaagccgctttcgtggacatcggccaggcccgtaac
ggcgtgctctacgccggtgaggtcaactgggacgccgcgcgtctcgaaggccagccgcgc
cgcatcgagttggcgttcaagtccggcgacccggtgctcgtgcaggtcaccaaggatccg
atcggacacaagggagcccgcctgacttctcaggtcacgctcgccggccgcttcctggtg
ctcgtgccgtccggcggcatgaccggcgtgagccgcaagctctccgaacgcgaacgtagc
cggctcaagggcatcgtctccaagatcgccccgaaggatatgggtgtcatcatccgtacc
gcagccgagggcgcctccgaggaagccatcgtcaaggatcttgagtctttggttcgccag
tgggagcgcatcaacgccaagcgtgaggaattctggcatggcaagcgcccgaagctcctg
cagggcgagcccgatgtggctatccgtgtggtgcgcgacatcttcaacgatgacttcggc
aagctcatcgtcgaaggcgacaaggtctacgaccgtatcgaggagtacctcgacaccatg
gcccccgacttgaaggataagctggagaagtgggacccggccgagcatgagggcaaggac
gtgttcgacaagtggcagatcgactcccagctcagaaagggcatggagcgtcaggtctac
ctgccgtctggtggttcgatcgtcatcgaccgcactgaagccatgaccaccattgatgtg
aacaccggccgcttcatcggcaagggcaagtcccttgaggagacggtgacgcgttgcaat
ttggaggcctctgaggaaattgcacgtcagctgcgactgcgcgacatcggcggcatggtg
atgattgactatgtggatatggtcatgcccgctaaccgtgacttggtgctgcgccgtcta
gtcgaatgcctggcgcgcgaccggaccaagcatcaggtggccgaggtcacctcgcttggt
ctggtgcagatgacccgtaagcgcatcggtcagggcttggtcgaggcgttctccgaggaa
tgcccgacttgcaagggtcgtggctttatcctgcacgatcagccgactgtttccgccgac
tacgatgacccgtacgcattgcgcggcggtgatccgttcgtcaagaccaacaagcatggt
cgaggcactgccccagctccggaaccggccggctccagcgctgatgtcaaggccaaactg
gcccagattgcagctgctgccgtggccgccaacaacaccgaggaggagtag
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