Bufo bufo (common toad): 120995453
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Entry
120995453 CDS
T07950
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03440
Homologous recombination
bbuf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120995453 (BRIP1)
03460 Fanconi anemia pathway
120995453 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
120995453 (BRIP1)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120995453 (BRIP1)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
120995453 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
120995453 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
120995453
NCBI-ProteinID:
XP_040280610
LinkDB
All DBs
Position
3:374332229..374689932
Genome browser
AA seq
1215 aa
AA seq
DB search
MSSTCSEYTIGGVKIVFPCKAYPSQLAMMNSIMRGLNCKQHCLLESPTGSGKSLALLCSA
LAWQQSQYGKPVDKDANDKEWKKEEPQHCSCTCHLNPPQKSAASASTSSDGAGSSSSGLL
STPNESFNHQTTLAAKLSAKKKASVATDDDDDFQTDRKRNLTSPSELQTRKRRCFEKGVH
YIDDDENDGNSSLSSSCCKQQKPPVPYASDDSAASSSKQHHEPCNLCLCGYDKKQDKADQ
NGKKKEDGQRQKVPKIYFGTRTHKQIAQITREMRRTAYSAVRMTILSSRDHTCVNPNVHS
NKNEKCRELIEAKDGPSCRYYYGAQKMSEQNILQYRLGFNQAWDIEELVGLGKRLRACAY
YAARELMTEADIIFCPYNYLLDSQIRESMNICLKDQVVILDEAHNMEDCARESASFSVTE
AQLLFARDEIDSMVIHGIRPSDHEPLRGVCYNLSHWIKQCADNLVERDYESSCKVWHGKE
ILSVFHAMGITNATFPMLKGNLAAVIEKEEKTTLLNGQESVVKIPTLSPPTQMVLKGLFV
VLDYLFRENNRFAEDYRIALQQVYTWTNKQDVADENGFFARPKNRRSVRQRTLLYTLNFW
CLNPAVAFSDLSGNARTIVLTSGTLSPMSSFSSELGVKFSIQLEASHVIQKSQVWVGTVG
AGPKGRKLCATFQHTETFDFQDEIGAVLLSVCQTMSHGVLCFLPSYKMLEKLKDRWMHTG
LWESLENIKTVIKEPQGGDKAEFDKLLQTYYDAIRFKGVKDGALLIAVCRGKVSEGLDFS
DDNARAVITVGIPFPNVKDLQVELKRKYNDQHSKTRGLLPGSQWYDIQAYRALNQALGRC
IRHKNDWGALILVDDRFRSNPKYITGLSKWVRQLVQHHSTFNSALESLVAFSTNQQQLVQ
ISSVVSDDMRPQEPSLSTNDSIISSSLLEVSIHPSDSVLQHAEETLSTPIRASQPSVITI
ISSSDQSGSDEDKKDRNKGDFNVFRAQRSKNTNFKREKGFPTKKQVTEKSEKQKLILTKQ
KSSFYSFFISSPLTSTPLPSSSRRDTYQNANLEVGALEGRCLAPSNKLTLDAPASTSNGD
CVQNVCNVTPLFCDNTNDVNNVLEKTEITEEEDEDVTIHFTPELFDNEIQRHSPDMKGAD
NFMLFPSDDGCITHNEDHNSDGKERGSENDLNTCNFNTIVDKVAVLPSEHSVDAQGEKKR
RNRLSRSKNKSFDLK
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccacgtgttcagaatatacaattggtggagtgaagattgtgttcccatgcaag
gcctatccttcccaacttgctatgatgaattcaattatgagaggattgaactgcaaacag
cactgtttgttggaaagtcctactgggagcgggaaaagtttggcattattgtgttctgca
ctcgcatggcagcagtctcagtatggaaagcctgttgacaaagacgcaaatgataaagag
tggaaaaaggaagagcctcaacattgtagttgcacatgtcatttaaaccctccccaaaaa
agcgctgcatctgcttccacttctagcgatggagctgggtcatcttctagtggccttttg
tcaactccaaatgagtcattcaatcaccaaactacacttgctgcaaaattatctgctaag
aaaaaagcttctgttgctacagatgatgatgatgattttcagactgatagaaaacgaaac
ctcacttcccctagtgagctgcagacgcgaaagcgacgctgttttgagaaaggggttcat
tatattgatgatgatgaaaatgatggcaacagcagtttatcctctagttgttgcaaacag
caaaaacctcccgttccatatgcatctgatgattctgcagcatcttcttcaaagcagcac
catgaaccttgtaatctctgcctttgcgggtatgataaaaaacaagataaagctgatcaa
aatggtaaaaagaaagaagatggtcaaaggcagaaggtgcctaaaatatattttggtacc
agaacacacaagcaaatagcccagattaccagggagatgaggagaactgcatactctgct
gttcggatgactattctttccagccgagatcacacctgtgttaaccccaatgtccatagt
aacaagaatgagaaatgcagagagctcattgaggcgaaggatggaccatcatgtcgttac
tactacggtgctcaaaagatgagtgagcagaacattttgcagtatagactgggatttaat
caggcatgggacattgaagagcttgtaggccttgggaaaagacttcgtgcttgcgcctac
tatgcagctcgtgaactaatgacagaagctgacattattttttgtccttacaattatctt
ttggactcacaaattagggaaagtatgaatatttgcttgaaagaccaggtggtaatccta
gatgaggcccacaacatggaggactgtgcccgggagtctgctagttttagtgttactgaa
gcccagttgctgtttgctcgagatgaaatagacagcatggttatccatggtatcagaccc
agcgaccatgaacccttacgaggggtttgttacaatctaagccattggataaagcaatgt
gctgacaatttggtggaaagagattacgaatcgtcatgtaaagtgtggcacggtaaagag
attctttcagttttccatgccatgggtataactaatgcaacgtttcctatgcttaaggga
aatctggctgctgtaattgaaaaggaggaaaagacaaccttgctaaatggacaggaatct
gtagtgaaaattccaactcttagccctccaacacaaatggtattgaaaggactctttgtt
gtcttagactatctgtttcgtgaaaacaacagatttgcagaggattacaggattgccttg
cagcaggtttacacatggacaaacaaacaagatgtagcagatgaaaatggattttttgca
agaccaaaaaaccggagaagtgttcgtcagagaactctgctttacacactaaacttctgg
tgcttgaacccagcagtggcattttctgatctaagtggcaatgctcgaactattgtcctc
acttcaggcacattgtctccaatgagttcattctcatctgaactaggtgtgaagttttct
atccagcttgaggccagtcatgttatccaaaaatcccaggtatgggttgggacagttggt
gctggtccaaaaggtcgtaaactttgtgcaacatttcagcatacagagaccttcgatttt
caggatgaaattggtgccgttttactatcagtgtgccagacaatgagccatggagttctt
tgcttcctgccttcctataagatgctggaaaaattaaaagacaggtggatgcacactggc
ttatgggagagcttagaaaacatcaagaccgtcattaaagagccgcaaggtggagataaa
gcggaatttgataaactgctgcagacatattatgatgcaattcgttttaaaggagtgaag
gatggtgccctcctgattgcagtttgtagaggtaaagtgagtgaaggactggatttctct
gatgacaacgcccgagctgtcataacagtaggaattccttttccaaatgttaaagaccta
caagttgaactgaaaaggaagtataatgaccaacactcaaaaactagaggacttctgcct
ggcagtcagtggtatgatatacaagcataccgagcccttaatcaggccttggggaggtgt
atcaggcataaaaatgactggggtgcacttattttagttgatgaccgtttcaggagtaat
ccaaagtatataactggtctgtcaaaatgggtgcggcagttggtccagcatcattctaca
tttaacagtgccctggagtctctggtagctttttctacaaatcagcaacagctggtccag
atatcaagtgtggtcagtgatgatatgcgtcctcaggaaccttctctttccaccaatgat
agcattatcagttcttcactgctggaagtctctattcatccttctgacagtgttttacaa
catgcagaagagaccctttctacacccatccgtgcctcccaaccatctgtaattacaatt
atctctagttctgaccagtcaggatctgatgaagataaaaaagacagaaataaaggtgat
tttaatgtttttagagcccagaggtctaaaaatacaaattttaaaagagaaaaagggttt
ccaactaaaaagcaagtgaccgagaaatctgagaagcagaaactgatcctcacaaagcag
aagtcatctttctactctttcttcatcagcagtcctctcacctcaactcctcttccctct
tcttcaaggagagacacctaccaaaatgctaatcttgaggttggagcacttgagggaaga
tgtttagccccatctaacaaactgactttggatgcacctgcctccaccagtaatggagac
tgtgttcaaaatgtgtgtaatgtcactccactgttttgtgacaatacaaatgatgttaat
aatgtactagaaaaaactgagataactgaggaagaggatgaggatgtcaccatccatttt
actcctgaactttttgacaatgagattcagaggcacagtcctgatatgaagggagcagac
aactttatgctgtttccatctgatgatggttgcattacacataatgaggaccacaacagt
gatggcaaagagagagggtcagaaaatgatttaaacacttgtaattttaatacaatagta
gataaagtggctgtgttaccaagtgaacattctgttgatgcacagggagagaagaaaaga
agaaatagactttctaggtcaaagaataaatcctttgatcttaagtaa
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integrated database retrieval system
