KEGG   PATHWAY: bmaz00630
Entry
bmaz00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Burkholderia mallei NCTC 10247
Class
Metabolism; Carbohydrate metabolism
Pathway map
bmaz00630  Glyoxylate and dicarboxylate metabolism
bmaz00630

Module
bmaz_M00012  Glyoxylate cycle [PATH:bmaz00630]
bmaz_M00621  Glycine cleavage system [PATH:bmaz00630]
Other DBs
GO: 0046487 0043648
Organism
Burkholderia mallei NCTC 10247 [GN:bmaz]
Gene
BM44_1769  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
BM44_2433  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
BM44_3949  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BM44_1765  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
BM44_3263  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BM44_1102  citrate synthase family protein [KO:K01647] [EC:2.3.3.1]
BM44_3256  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
BM44_3267  acnA; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
BM44_1906  acetyl-CoA C-acetyltransferase family protein [KO:K00626] [EC:2.3.1.9]
BM44_2012  acetyl-CoA C-acetyltransferase family protein [KO:K00626] [EC:2.3.1.9]
BM44_2017  acetyl-CoA C-acetyltransferase family protein [KO:K00626] [EC:2.3.1.9]
BM44_977  acetyl-CoA C-acetyltransferase family protein [KO:K00626] [EC:2.3.1.9]
BM44_601  acetyl-CoA C-acetyltransferase family protein [KO:K00626] [EC:2.3.1.9]
BM44_2013  phbB-1; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
BM44_3509  phbB; acetoacetyl-CoA reductase family protein [KO:K00023] [EC:1.1.1.36]
BM44_713  FAD binding domain protein [KO:K00104] [EC:1.1.99.14]
BM44_714  FAD binding domain protein [KO:K11472] [EC:1.1.99.14]
BM44_715  4Fe-4S binding domain protein [KO:K11473] [EC:1.1.99.14]
BM44_4253  katB; catalase [KO:K03781] [EC:1.11.1.6]
BM44_1380  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BM44_4075  gph; phosphoglycolate phosphatase, bacterial [KO:K01091] [EC:3.1.3.18]
BM44_1508  glutamine synthetase, catalytic domain protein [KO:K01915] [EC:6.3.1.2]
BM44_1630  glnA; glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
BM44_1275  beta-eliminating lyase family protein [KO:K00600] [EC:2.1.2.1]
BM44_4014  glyA2; serine hydroxymethyltransferase 2 [KO:K00600] [EC:2.1.2.1]
BM44_298  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
BM44_296  gcvT; glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
BM44_2085  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BM44_3748  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BM44_1651  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BM44_297  gcvH; glycine cleavage system H protein [KO:K02437]
BM44_1879  glycerate kinase family protein [KO:K00865] [EC:2.7.1.165]
BM44_3648  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BM44_688  eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BM44_4221  oxdD; oxalate decarboxylase oxdD [KO:K01569] [EC:4.1.1.2]
BM44_3198  Tat (twin-arginine translocation) pathway signal sequence domain protein [KO:K00123] [EC:1.17.1.9]
BM44_2812  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
BM44_3195  fdxH; formate dehydrogenase, beta subunit [KO:K00124]
BM44_2811  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region family protein [KO:K00124]
BM44_3194  formate dehydrogenase, gamma subunit [KO:K00127]
BM44_2810  thioredoxin-like [2Fe-2S] ferredoxin family protein [KO:K00127]
BM44_2393  alpha/beta hydrolase fold family protein [KO:K01432] [EC:3.5.1.9]
BM44_2876  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
BM44_4025  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BM44_393  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BM44_1506  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bmaz00010  Glycolysis / Gluconeogenesis
bmaz00020  Citrate cycle (TCA cycle)
bmaz00030  Pentose phosphate pathway
bmaz00053  Ascorbate and aldarate metabolism
bmaz00071  Fatty acid degradation
bmaz00230  Purine metabolism
bmaz00250  Alanine, aspartate and glutamate metabolism
bmaz00260  Glycine, serine and threonine metabolism
bmaz00620  Pyruvate metabolism
bmaz00710  Carbon fixation in photosynthetic organisms
bmaz00750  Vitamin B6 metabolism
bmaz00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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