Bosea sp. Tri-49: BLM15_05425
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Entry
BLM15_05425 CDS
T05753
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
boi
Bosea sp. Tri-49
Pathway
boi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLM15_05425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boi03019
]
BLM15_05425
03009 Ribosome biogenesis [BR:
boi03009
]
BLM15_05425
Enzymes [BR:
boi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BLM15_05425
Messenger RNA biogenesis [BR:
boi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BLM15_05425
Ribosome biogenesis [BR:
boi03009
]
Prokaryotic type
rRNA processing factors
BLM15_05425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AZO77112
LinkDB
All DBs
Position
complement(1105747..1108524)
Genome browser
AA seq
925 aa
AA seq
DB search
MANKMLIDATHPEETRVVVSRGSRIEEFDFESASRKPLRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPIADRQALLAEDARAEREEERDEEKRERRGRRGRRDRDG
RDNRAKRTAESGETVSAEVEAGNGHVETDGKEAAMVNEGAPAFGDSFAPAVAESDSESVV
ENAAPLTFETVEVAASEDAGEETQARRPSQDDENGDDENGGEEAQEEPEQLGGGDALDDI
AERPHRHSRRQYKIQEVIKRRQIILVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTGKG
GGISRKITNAEDRKRLKEIAQELEVPEGMGIILRTAGASRTKPEIRRDYEYLMRMWESVR
ELTLGSVAPALVYEEGNLVKRSIRDLYNKDIDEVHVAGENAYREAKDFMRMLMPSHAKSV
KPYREQTPLFAAFGVESQLDAMFSNTVTLKSGGYIVINQTEALVAIDINSGRSTREHNIE
DTALKTNLEAAEEISRQLRLRDLAGLIVIDFIDMEENRNNRAVEKKLKECLKNDRARIQV
GRISAFGLLEMSRQRIRTGVLESSSVPCPHCAGAGLVRSTPSIALQILRALEEALIKSAS
HNLEVRTRPEVALYVLNQKRAHLRDLEERFNIAIIISADAALLGTRYFEVERGEFVGNEN
RVVPVSSMRAEAIIDEPEDDDIVEAEVEVEVEIESGAEGETAAEPRAAAEGESQESRDGR
RRRRRRRRRRGGERDSQGQLVEGAADESDEQDDEGSDDDAVGESDDAAPASAAASLEEPA
APVIETPTPEPEAGAKPKRPRRGRAKKADAEAETVEAPKEAAKEAAKAAPAEETVAEPAE
KPKRSRSRKKVVPITEDGIAAAPVEVAPAPEPAAPVIAVAPEPAPAVEAPPAPRVIEEPV
AVVLTPPDPDRPKRGGWWNKLAGRK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagatgcttatcgatgccacccacccggaagagacccgggtcgtggtgtcc
cgcggctcgcgtatcgaagagtttgatttcgaatctgccagccgcaagccgctccgcggt
aatatctatctggcgaaggtgacgcgggtggagccatcgctccaggccgccttcgtcgaa
tatggcggcaatcgccacggcttcctcgccttctccgaaatccacccggattactatcag
atcccgatcgccgaccggcaggcgctgctcgccgaggacgcccgcgccgagcgcgaggaa
gagcgtgacgaggaaaagcgtgagcgccgcggccgccgtggccgccgcgatcgtgacggc
cgcgacaaccgcgccaagcgcaccgccgagagcggcgagaccgtcagcgccgaggtcgag
gccggcaacggtcatgtcgagaccgacggcaaggaagccgcgatggtcaacgagggcgcg
ccggctttcggcgattcattcgccccggccgtcgccgaatccgacagcgagagtgtcgtc
gagaacgccgctccgctgaccttcgagaccgttgaggtcgccgcttcggaagatgctggc
gaggagacgcaggcgcgccggccgtctcaggacgacgagaacggcgatgacgagaacggc
ggcgaagaggcgcaggaagagccggagcagctcggtggcggcgacgccctcgacgatatc
gccgagcggccgcatcgccattcgcgccgccagtacaagatccaggaggtgatcaagcgc
cgccagatcatcctggtccaggtcgtcaaggaagagcgcggcaacaagggcgcggccctc
accacctatctctcgctcgccggccgctattccgtgctgatgccgaacaccggcaagggc
ggcggcatctcgcgcaagatcaccaatgccgaggaccgcaagcgcctgaaggagatcgcc
caggagctggaggtgccggaggggatgggcatcatcctgcgcaccgccggcgcctcccgc
accaagccggagatcaggcgcgactacgaatatctgatgcggatgtgggagagcgtgcgc
gagctgacgctcggctcggtcgccccggcgctggtctatgaggagggcaacctcgtcaag
cgctcgatccgcgacctctacaacaaggacatcgacgaggttcacgtcgccggcgagaac
gcctatcgcgaggcgaaggacttcatgcgcatgctcatgccgagccatgccaagagcgtg
aagccctatcgcgaacagaccccgctcttcgccgccttcggcgtcgagagccagctcgac
gcgatgttctcgaacaccgtgacgctgaagtcgggcggctacatcgtcatcaaccagacc
gaggcgctggtcgcgatcgacatcaactccgggcgttcgacccgcgagcacaacatcgag
gacaccgccctcaagaccaatctcgaagcggcggaggaaatctcccgccagctgcgcctg
cgcgaccttgccggtctcatcgtgatcgatttcatcgacatggaggagaaccgcaacaac
cgcgcggtcgagaaaaagctgaaggagtgcctgaagaacgaccgcgcccgcatccaggtc
ggtcgcatctccgccttcggcctgctcgagatgtcgcgccagcgcatccgcaccggcgtg
ctcgagagctcctcggtgccctgcccgcactgcgccggcgccggcctcgtccgctcgacg
ccgtcgatcgcgctgcagatcctgcgcgcgctcgaggaggcactgatcaagagcgcctcg
cataacctcgaagtccgcacccggcccgaggtcgcgctctatgtgctcaaccagaagcgt
gcccatctgcgcgacctggaagaacgcttcaacattgccatcatcatctcggccgacgcg
gccctgctcggcacccgctatttcgaggtcgagcgcggcgagttcgtcggcaacgagaac
cgcgtcgtgccggtgtcgagcatgcgcgccgaggcgatcatcgacgagccggaggacgac
gatatcgtcgaggccgaagtcgaggttgaggtcgagattgaaagcggggccgaaggcgag
accgcggctgagccgcgcgccgctgccgagggcgaaagccaggagagccgcgacggtcgc
cgccggcgtcggcgtcggcgtcgccggcgcggtggcgagcgtgatagccaaggccagctg
gtggaaggcgccgccgacgagtccgatgagcaggacgacgaaggcagcgatgacgacgcc
gtcggcgaatcggacgatgccgccccagcttccgctgcggcttcgcttgaagagccggcc
gccccggtgatcgagaccccgacgcccgagccggaagctggtgccaagccgaagcgcccc
cgccgtggccgcgccaagaaagcagacgccgaagctgagaccgtcgaagctcccaaggaa
gctgcgaaggaagccgccaaggctgcccccgcggaggagacggtcgccgaaccggccgag
aagcccaagcgcagccgctcgcgcaagaaggtcgtgccgatcaccgaggacggcatcgct
gccgctccggtcgaggtggcgccagcacctgaaccagctgcgcccgtgatcgctgttgcg
ccggaaccggcgcccgccgtcgaggcgccgcccgcgccgcgcgtgatcgaggagcctgtc
gcggtcgtgctgaccccgcccgatccggatcgacccaagcgcggcggctggtggaacaag
ctggccggacgcaagtag
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