Chryseobacterium capnotolerans: H5J24_09980
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Entry
H5J24_09980 CDS
T08205
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ccao
Chryseobacterium capnotolerans
Brite
KEGG Orthology (KO) [BR:
ccao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccao03009
]
H5J24_09980
Enzymes [BR:
ccao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
H5J24_09980
Ribosome biogenesis [BR:
ccao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H5J24_09980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
DUF6831
Motif
Other DBs
NCBI-ProteinID:
UHO40276
LinkDB
All DBs
Position
complement(2159173..2160354)
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AA seq
393 aa
AA seq
DB search
MSRDNNNSDRSKRPRISTKKSSDDSRASRSGNSSGSKPFKKPFSKDGARKGPEHSGSNSR
FEKKPFKKNTGSFNSSSDDSESKSESRAYITNKSESYERKSFGKPKRGGKSFDTRDKYER
GSLKYGRRPSNGDEKADDKTRSFVQKRRLNKIDKDIHKDSIRLNKYIANSGICSRREADE
LITQGLVEVNGKVVTEMGYQVQKTDRVVFDGQSITPEKPVYVLLNKPKGYISTTKDDKAR
KTVMDLVANASPYRLFPVGRLDRSTTGVILLTNDGHMTKKLTHPSFDAKKIYHVTLDKKL
TGEDLRLIAEGIRLDEGVAVVDQISYIEGKPKNEIGIEIHIGWNRVIRRIFQRLGYEVES
LDRVMFAGLTKKNIKRGHWRILSELEVNNLKML
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagataataataattcagacagatcaaagagaccaagaatttcaaccaagaaa
agttctgatgattctcgtgcttccagatctggaaattcttcaggatcaaaaccttttaaa
aagcctttctctaaagatggagcaagaaaaggtcccgaacattcaggatccaactcaaga
tttgaaaagaaaccattcaagaaaaataccgggagttttaatagctcaagtgatgattct
gaatcaaaatctgaaagtagagcttatatcacgaataaaagtgaaagctacgaaagaaaa
tcttttggaaaacctaaaagaggaggaaaaagcttcgatactagagacaagtatgaaaga
ggcagcttgaaatatggtagaagaccatctaatggagacgaaaaagctgatgataaaaca
agatcttttgtacagaaaagaagactgaacaagattgacaaagacattcataaagacagc
atccgtcttaataagtatattgctaattccggaatctgcagcaggagagaggctgatgag
cttatcactcaagggcttgtagaggtaaacggaaaagtagtaactgaaatgggatatcag
gtacagaaaaccgatagagttgtttttgacggacaaagcattaccccggaaaaaccggta
tatgtacttctaaacaaaccaaaagggtatatttctactactaaggatgataaagcaaga
aaaaccgtaatggatcttgttgcgaatgcttctccttatagacttttcccggttggaaga
ttagatcgttctactacaggagttatcttattgaccaatgacggacacatgactaaaaaa
cttacgcatccatcttttgatgctaagaagatataccatgtaacgttggataagaaactg
actggtgaagatttacgtcttattgcagaaggaattcgtcttgatgaaggagtagcggta
gtagatcagatttcttacattgaaggtaaacctaagaatgaaatcggaattgagatccac
atcggatggaaccgtgttatcagaagaattttccaaagattagggtacgaggtggaatcg
ttagatcgagtaatgtttgccggattaacgaagaaaaacattaagagaggacactggaga
attctttcagaactggaagtgaacaatcttaaaatgctttaa
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