Cellulosimicrobium cellulans: CBR64_19765
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Entry
CBR64_19765 CDS
T04858
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cceu
Cellulosimicrobium cellulans
Brite
KEGG Orthology (KO) [BR:
cceu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cceu03016
]
CBR64_19765
Enzymes [BR:
cceu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CBR64_19765
Transfer RNA biogenesis [BR:
cceu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CBR64_19765
Prokaryotic type
tRNA splicing ligases
CBR64_19765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ARU54076
UniProt:
A0A1Y0I2S1
LinkDB
All DBs
Position
complement(4552493..4553665)
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AA seq
390 aa
AA seq
DB search
MWAHEHAVEPAALQQLRNIAALPWVEGVRVMPDVHLGKGATVGSVIAMRDAVSPNAVGVD
IGCGMIGVRTSLTAEDLPDDLGPVRARIEAAIPVGFHAHDEAVDPHRLRSISGRGPAEVA
RGADAFWSRFSGLHGRVSDIEGRARRQLGTLGGGNHFVELCVDQAGSVWLQLHSGSRNIG
KTLAEQHVAVAKRLEHNQGLVDRELAVFLGGTPEMDAYLADLWWAQEYAARSRAVMMTLV
VDAVRASFPGREIAFDEAVNVHHNYVAVEHVDGQELVVTRKGAIRAGKGDLGLIPGSMGT
GSYIVRGLGNPESYWSASHGAGRRMSRTKAKKTFTLDDLAVQTAGVECRKDAGVLDEIPG
AYKDLDEVVRAQSDLVEVVARLTTLLCVKG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcgcacgagcacgccgtcgagcccgccgcgctccagcagctgcgcaacatcgcc
gcgctgccgtgggtcgagggcgtgcgcgtcatgcctgacgtccacctcggcaagggcgcg
accgtcggctcggtcatcgcgatgcgcgacgccgtgtcgcccaacgccgtcggcgtcgac
atcggctgcggcatgatcggcgtccgcacgtcgctcacggccgaggacctgcccgacgac
ctcggcccggtccgcgcgcgcatcgaggccgcgatccccgtcgggttccacgcgcacgac
gaggcggtcgacccgcaccgtctgcgctcgatctccgggcgcggcccggccgaggtcgcg
cgcggcgcggacgcgttctggtcgcggttctccggcctgcacgggcgtgtctcggacatc
gagggtcgggcgcgccgccagctcggaacgcttggtggaggcaatcactttgttgagttg
tgtgtagatcaggcgggttctgtttggcttcagctgcactcggggtcgcgcaacatcggc
aagacgctcgccgagcagcacgtcgccgtcgcgaagcgcctcgagcacaaccaggggctc
gtcgaccgcgagctcgcggtgttcctcggcggcacgccggagatggacgcgtacctcgcc
gacctgtggtgggcgcaggagtacgcggcgcggtctcgcgcggtgatgatgacgctcgtc
gtcgacgccgtgcgtgcctcgttcccgggtcgtgagatcgcgttcgacgaggccgtgaac
gtccaccacaactacgtcgcggtcgagcacgtcgacgggcaggagctcgtcgtgacccgc
aagggcgcgatccgggccgggaagggtgacctcggcctgatccccgggtcgatgggcacc
ggctcgtacatcgtgcgcgggctcgggaacccggagtcctactggtcggcgtcgcacggc
gcggggcggcgcatgtcccgcaccaaggcgaagaagaccttcacgctggacgacctcgcc
gtccagacggccggcgtggagtgccgcaaggacgccggggtgctcgacgagatcccgggt
gcgtacaaggacctcgacgaggtcgtccgcgcgcagtccgacctcgtcgaggtcgtcgcc
cgcctcacgacgctcctctgcgtcaagggctga
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