Cricetulus griseus (Chinese hamster): 100755872
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Entry
100755872 CDS
T02813
Symbol
Clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100755872 (Clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100755872 (Clp1)
Enzymes [BR:
cge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100755872 (Clp1)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100755872 (Clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_18
AAA_16
TniB
AAA_22
AAA_10
CbiA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
100755872
NCBI-ProteinID:
XP_027278477
UniProt:
G3HRH9
LinkDB
All DBs
Position
6:90802619..90807316
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AA seq
425 aa
AA seq
DB search
MSEESNDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKSSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggaatccaatgatgacaagaagccaacaactaaatttgaactagagcgagaa
acagagcttcgatttgaggtggaagcatctcagtcagttcaactggaattgttggctggc
atggcagagatctttggcacagagcttaccagaaacaagaaattcacctttgatgctggt
gccaaggtggctgttttcacttggcatggctgttctctgcaactgagtggccggaccgag
gtggcttatgtctctaaggacacccctatgttgctttacctcaacactcatacagccttg
gagcagatgcggaggcaggcagaaaaggaagaagagagaggcccccgagtgatggtagtg
ggtcctactgatgtgggcaagtccacagtgtgtcgactgctactcaactatgcagtgcgt
ttgggccgccgccctacctatgtggagctggatgtgggtcagggctctgtgtccatccct
ggtaccatgggagccctctatattgaacggccggcagatgtggaagaaggtttctccatc
caggcccctcttgtatatcattttggctccaccactcctggcaccaacatcaagctttat
aataagattacatcacgtttagccgatgtgttcaaccaaaggtgtgaagtgaacagaagg
gcttctgtgagtggctgtgtcattaacacctgtggttgggtcaagagctctggttaccag
gccctggtgcatgcagcttccgcctttgaagtggacgtggttgtggttctggatcaagaa
cgactgtacaacgaattgaaaagggacctgcctcattttgttcgaactgtgttgcttcca
aaatcagggggcgtggtagaacgctccaaggacttccggcgggaatgtagggatgagcgt
atccgtgagtatttctatggattccgaggctgtttctatccccatgccttcaatgtcaaa
ttttctgatgtgaaaatctacaaagttggggcaccaaccatcccagactcctgtttacct
ctgggcatgtctcaggaagacaatcagctcaagttagtacctgtcacccctggcagagat
atggtacaccatctcctgagtgtcagcactgctgagggaacagaggagaacctttctgag
acaagtgtggctggattcattgtcgtgaccagtgtggatctggaacaccaggtgtttact
gtactgtctccagcaccccgtccactgcctaagaactttcttctcatcatggatatccgg
ttcatggatctcaagtaa
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