Chryseobacterium gallinarum: OK18_06740
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Entry
OK18_06740 CDS
T03954
Name
(GenBank) RNA 2',3'-cyclic phosphate--5'-hydroxyl ligase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cgn
Chryseobacterium gallinarum
Brite
KEGG Orthology (KO) [BR:
cgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgn03016
]
OK18_06740
Enzymes [BR:
cgn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
OK18_06740
Transfer RNA biogenesis [BR:
cgn03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
OK18_06740
Prokaryotic type
tRNA splicing ligases
OK18_06740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AKK74817
UniProt:
A0A0G3MCI6
LinkDB
All DBs
Position
complement(1500463..1501854)
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AA seq
463 aa
AA seq
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MGNLKLKGKDILKLGYPNNQSVNVALEVMKRNFATKNIQYVKSLLKEILLNPENFEKDLT
FGQIAETLLSSKKTEKRMLNAQRASFQVFGNTISEEAKNQLYTALKLPISVQGALMPDAH
SGYGLPIGGVLAVENAVIPYGVGMDIGCRMSLSILDTPVSYLDGARDKYEKALAEHTKFG
MYETHKSHVDHEIFERDTFDLIPILRRLKGKAVKQMGTSGGGNHFVEFGEVEITEVDEQI
GLPAGKYLGILSHSGSRGLGAEIAQYYSRVAADQCPLPKEAQQFAWLDLSSHMGLEYWTA
MTLAGDYASACHNDIHRRLIKAVGGRVKARIENHHNFAWKEVHNGKEVIVHRKGATPADE
NELGMIPGSMTAKGFIVRGKGNPDSLKSASHGAGRSHSRGECRSLFTQNDIKKELKLKNV
TLIGGNAEEAPMAYKDIYEVMNAQSELVDILGTFQPRIVRMDR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatttaaaactaaaaggaaaagatatattaaaactcggatatccaaataaccaa
agcgtcaatgtcgccttggaagtgatgaagagaaattttgccaccaaaaatatccagtat
gtgaaatcgcttttgaaagaaattttgctgaacccggaaaactttgaaaaagatctgact
tttggccagattgcagaaacactgctttcatcgaagaaaacggaaaaaagaatgctaaat
gcacagcgtgcttcttttcaggtttttggaaatactatttcggaagaggcaaaaaaccag
ctgtacacagcactgaaacttccaatatcagttcagggagctttaatgccagatgcccac
agtggctatggtcttccgattggaggtgttctcgctgtagaaaatgcagtgattccgtac
ggagtaggaatggatattggctgtagaatgagcctgagtattctggatacgcctgtttca
tatctggacggagcgagagataaatatgaaaaagcccttgctgaacacaccaaattcggg
atgtatgaaacccataaatctcatgtagatcatgaaatttttgagagggatacatttgat
ctgatcccgattttaagaagactaaaaggaaaagctgttaaacagatgggaacatcaggc
ggcggaaaccattttgtagaattcggggaagtggaaatcacggaagtcgatgaacagata
gggctgcctgcaggaaagtacctgggtattttgtcgcatagtggctcaagaggattaggg
gcagaaattgcccagtattattccagggtagcggcagatcagtgtccccttcccaaagaa
gctcagcagtttgcctggctggatttaagttcccatatggggttagaatactggacggca
atgacgctcgcaggagattatgcatcagcgtgccataatgatattcacaggagattaata
aaagctgtaggaggaagagtgaaagcaagaattgaaaatcatcacaattttgcatggaaa
gaagttcacaacggaaaagaagtgattgttcacagaaaaggagcaactccggctgatgaa
aatgaactgggaatgatcccggggtctatgaccgctaaaggatttatcgtccgtggaaaa
ggaaacccggattctcttaaatctgcttcacatggtgccggaaggtcccattcaagagga
gaatgcagaagccttttcacccagaatgatatcaaaaaagaattaaagctgaaaaatgtt
acactgataggcggaaacgctgaggaagcaccaatggcttataaagatatttacgaagtc
atgaatgcccaaagtgaattggtggatatattgggaacatttcagccaagaattgtgaga
atggacaggtag
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