Cottoperca gobio: 115026233
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Entry
115026233 CDS
T07513
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgob03009
]
115026233 (spata5l1)
Enzymes [BR:
cgob01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
115026233 (spata5l1)
Ribosome biogenesis [BR:
cgob03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
115026233 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_22
AAA_33
AAA_14
TIP49
AAA_7
bpMoxR
NTPase_1
Rad17
NACHT
Mg_chelatase
nSTAND3
Motif
Other DBs
NCBI-GeneID:
115026233
NCBI-ProteinID:
XP_029314812
Ensembl:
ENSCGOG00000012018
UniProt:
A0A6J2RWV4
LinkDB
All DBs
Position
3:complement(12914642..12919348)
Genome browser
AA seq
747 aa
AA seq
DB search
MSLRLLSVDPSDQGSQRCRMGPGLMSALGLSLGSPLLVSVPGGSCLCTAWPRPDLAEGFL
QMDLKCSSLSLISHPPTHLNLDPGKLTPVPCPKLKGVKITLVVQSVDFKKHTPPRLVHEL
VKDMLRGVFVHNKYVINLEDFDVDIRYVVIESINPDSASSGFITSKTGVEIAGIQTVRHY
RSQLQDQQTVPLGGLEEVSASLREMLQLPLLYPGSLSSLGVSCPRGVLLVGPPGVGKTLL
VRRVVGEVGASLVVVRGPEVVGSRPGESEEKLRAVFERARYAAEEGPCVLFLDELDSLCP
RRTGSSAPENRLVAQLLTLMDGMNQSDRFLIVGATNRPDSLDPALRRPGRFDREVIIGAP
TLQQRKAILSVLCARMPVCPSVDMAELAQRTTGYVGADLSALCREAAMHAIRENSKSSGE
QAVGMKHFQEALKAVRPSCLRSSLGRTELPPLSWDQIGGLDEVKLKLRQSIEWPMLYPEA
FVRLGLCQPRGVLLYGPPGCAKTTLVKAAASSSHCAFLSVSGADLYSPYVGDSEKALAQL
FREARACAPCILFLDEIDSLIGSRSNSQTPNSVQTRLLSVLLNEMDGIGLKTLDRSGTEK
ILQAEGVEESRTQKQLDCQEVCNKDVMVVAATNRPDCLDSALLRPGRLDHIIYVPPPDQQ
ARLCILKMCTKSMPVAADVCLEELAAETELYSGADLENLCKEAALLALQEENMEASAIKH
TYFLRSLSKMSPSLTAQQIQTYQKPPR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaggctgctgtcagtggatccatcagaccagggctctcagagatgcaggatg
ggtccaggcttgatgtcagcgctgggtctgagtctgggctccccgctgctggtgtctgtt
cccgggggaagctgcctgtgcactgcctggccccggcctgacctagcagagggcttcctg
cagatggacctgaaatgttcctctctcagcctgatctctcacccacccactcatctcaac
ctggaccctggcaagctcacacctgtgccctgccccaaactgaaaggtgtaaagataact
ttggtggtccagagtgttgactttaaaaaacatacacctcctcgacttgttcacgagctt
gtgaaagacatgttgagaggtgtgtttgtccacaataagtatgtgataaacctggaggat
tttgatgtagacattagatatgttgttattgaaagcatcaatccggactctgccagttct
ggattcatcacctcaaaaactggtgtggagatagctggcatccagacggtccggcattac
aggagtcagctgcaggaccagcaaacagtcccactggggggtctggaggaggtgagtgcc
tccctgagagagatgctgcagctgcccctgctctatccaggctcactgagctctctcggt
gtgtcgtgtcccagaggtgtactcctggtggggcctccgggtgtgggcaagaccctgctg
gtccgcagagtggtgggggaggtgggagccagtctggtggtggtcagagggcctgaggtg
gtgggatcacggccgggtgaaagtgaggagaagttgcgagctgtgtttgagcgggctcga
tatgcagctgaagagggtccgtgtgtgctgttcttagatgagttagactctctgtgtccg
aggaggaccggctcgtctgcaccggagaaccgcctggttgctcagctcctcactctgatg
gacgggatgaaccagtctgatcgcttcctcatcgtcggagccaccaaccggccggacagc
ttagacccagcgctgcgcaggcctggaagatttgacagagaggttatcattggagctccc
accctgcagcagagaaaagccatcttgtccgttctgtgtgcgaggatgcccgtgtgtcca
agtgtggacatggcagagctcgcacagagaactacaggctatgtaggagcagacctcagc
gccctgtgcagagaggctgccatgcacgctatacgggaaaactcaaagagttcaggagag
caggcggttggtatgaagcacttccaggaagccctgaaggcggtgcgtccctcctgcctg
cggagcagcctgggcaggacagagttgcctccactgtcatgggatcagataggaggcctg
gatgaggtcaaactcaaactaagacagagtattgaatggccgatgttatacccagaggcg
tttgttcgtctgggtctgtgtcagccccgcggcgtgctgctctacggacctccaggatgt
gcaaaaacgaccctcgtcaaggctgcagccagctcatctcactgtgccttcctgtctgtc
agtggggctgacctctactctccctatgtcggagactcagagaaggctttagcgcagctg
tttcgcgaggcccgggcctgtgctccctgtatcctgttccttgatgaaattgactctctg
attggctcgcggtcaaacagtcagacaccgaacagcgtacagacacgcctcctgtctgtg
ctcctgaatgagatggatggaattggcttgaagacactggacaggagcgggacggagaag
atcctccaggcggagggagtggaggagagtcgcacacagaaacagctggactgccaggaa
gtatgcaacaaagatgtgatggttgtagccgccacaaacagacctgactgcttagacagt
gccctcctcagacctggcagactggaccacatcatctatgttcctccacctgaccagcag
gctcgtctttgcatcctgaagatgtgtacaaagtcgatgccagtggctgctgatgtgtgt
ctggaggagctggccgcagagaccgagctttattctggagccgacttggaaaatctgtgt
aaagaggctgctctgttggcgctgcaagaggagaacatggaggcttctgccatcaaacac
acgtacttcctccggtctctcagcaagatgagcccctccctcactgcccagcagatccaa
acatatcaaaaacctcccagatga
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integrated database retrieval system
