Clupea harengus (Atlantic herring): 105890973
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Entry
105890973 CDS
T09045
Symbol
sgpl1
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X4
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00600
Sphingolipid metabolism
char01100
Metabolic pathways
Module
char_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
105890973 (sgpl1)
Enzymes [BR:
char01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
105890973 (sgpl1)
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
SepSecS
BLH_phosphatase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
105890973
NCBI-ProteinID:
XP_012672557
Ensembl:
ENSCHAG00000004934
UniProt:
A0A6P3VIQ8
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Position
13:3747450..3759911
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AA seq
563 aa
AA seq
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MDYWSALEVYREMILLYAEEGRKQVNLTCADLEPWQIIAATILSTLGVVWVKGFVFQQES
LMSRMKKQFFRIIRKIPFVGTTIQGQLNKALDDMSQSLCTLKDGMSYIQKLPAQGLTEEQ
VLQRIREYQTLNEVQWKNGKVSGAVYWGDETLTKLLVQVYGDFAWSNPLHPDIFPGVRKM
EAEVVRMACDLFNGGSDSCGAVTSGGTESILMACKAYRDMAYERGVKHPEILAPVSVHAA
FDKAAHYFGMKLVHIPLDNKTMQVDVKAMKSAISKNTAMLVCSAPQFPHGVIDPIEEVAK
LALRYKIPLHVDACLGGFLITFMYKCGFPLAPFDFRVKGVTSISADTHKYGYAPKGSSVV
LYSSKEYRHYQYFVAPDWQGGIYASPSIAGSRPGGIIAACWATMMYMGEKGYVDATRKVI
TTTRTIDEELRQIDGIFVFGKPEVSVVAIGSDVFDIFRLSNALTTKGWNLNTLQFPSSIH
ICVTVLHTQPGVADEFISDVREQVDVIMKNPKEKTTGMGAIYGMAQSIPDRSMVTEISHG
FLDCLFSTEDPKAKNNHMNGKAH
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggactactggagtgccttggaggtgtacagggagatgattcttctgtatgcagaggag
ggtcgtaagcaggtgaacttgacgtgtgctgacctggagccatggcagatcattgctgcc
accatactctccaccctaggagtggtgtgggtcaaaggctttgtctttcaacaagagagt
ctgatgtcacgaatgaagaagcagttctttcgcattatcagaaaaataccctttgttggc
acgacaattcagggccagctaaacaaggccctggatgacatgtctcagagcctgtgcacc
ctgaaggacggcatgtcctacatccaaaagctaccagcacagggactcaccgaggagcaa
gtcctgcagcgcatccgagagtaccagactctgaatgaggtgcagtggaagaatggcaag
gtgtccggtgctgtgtactggggagatgagacgctgaccaagctcctggtgcaggtgtac
ggggactttgcctggagcaaccccctccacccagacatcttcccaggggtgaggaaaatg
gaggctgaggtggtgcgcatggcctgtgaccttttcaatggtggatcggactcctgtggc
gcagttacgtctggagggactgagagtatcctcatggcctgtaaggcctacagggatatg
gcctatgaacgtggggtcaagcacccagaaatccttgctccagtcagtgtccacgctgcc
tttgacaaagctgctcattactttggcatgaagctcgtccacatacctctggacaacaag
accatgcaagtggacgtgaaggccatgaagagtgccatctctaagaacacagccatgctg
gtgtgctctgcccctcagttccctcatggagtcatagaccccatagaggaggttgcgaag
ctggctttacggtataagatccctctccatgtggatgcctgtttgggagggtttctcatt
accttcatgtacaaatgtggcttccctctagcaccatttgacttccgggtcaaaggggtg
accagcatctctgcagatacacacaagtatggctacgcccccaaaggctcctcagtggtg
ctctacagcagtaaggagtaccgccactaccagtacttcgtggccccagactggcagggt
ggcatctacgcctctccctcgatcgctggctccaggccgggaggcatcatcgcggcgtgc
tgggccaccatgatgtacatgggggagaagggttacgtggacgccaccaggaaggtgatc
acgacgacccgcactattgacgaagaactgcgtcaaatagacggaatatttgttttcggg
aaacccgaggtgtccgttgtggcgatagggtcggatgtctttgacatcttccgcttgtcc
aacgctctcacgaccaagggttggaatctcaacacactgcagtttccttctagcatccat
atttgtgtcacagtgttgcacacgcagcctggcgtggctgacgagttcatcagtgacgtc
cgggagcaggttgacgtcatcatgaagaacccgaaggagaagaccacaggaatgggagct
atttatggtatggcgcagtccatcccagaccgatcaatggtgacggagatttctcacggg
tttttggactgcctcttcagcacagaagaccccaaagccaagaacaaccacatgaatggc
aaagcccactga
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