Chromobacterium phragmitis IIBBL 112-1: DK842_13110
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Entry
DK842_13110 CDS
T05549
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
chri
Chromobacterium phragmitis IIBBL 112-1
Pathway
chri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DK842_13110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chri03019
]
DK842_13110
Messenger RNA biogenesis [BR:
chri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DK842_13110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AXE30746
UniProt:
A0A344ULH5
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All DBs
Position
2734686..2735210
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AA seq
174 aa
AA seq
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MLDRDGYRPNVGIILTNAKNEVFWGKRVREHSWQFPQGGIKPGESPEAAMYRELLEEVGL
LPQHVKILGRTRDWLRYEVPTNWVRREWRGSYKGQKQIWFLLRLVGRDSDVCLRATNHPE
FDGWRWNDYWAPVDAVIEFKHDVYERALSELARFLRGVESHHAYLARTSSQSEQ
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgctggaccgggacggataccgcccaaacgtcggaatcatcctcaccaacgccaagaac
gaggtgttctggggcaagcgcgtgcgcgagcattcctggcagttcccgcaaggcggcatc
aagccgggcgaaagcccggaggccgcgatgtaccgcgaactgctggaggaggtgggattg
ctgcctcagcacgtgaagatactgggacgcacgcgcgactggctgcgttacgaggtgccg
acgaattgggtacgccgcgagtggcgcggcagttacaagggccagaagcagatctggttc
ctgctcaggctggtggggcgggacagcgacgtctgcctgcgcgcgacaaaccatccggag
ttcgatggctggcgctggaacgactactgggcgccggtggacgcggtgatcgagttcaag
cacgacgtttacgagcgcgcgctgtccgaactggcgcgctttctgcgcggggtggagagc
catcacgcctatctggcgcgcacctccagccagagcgagcagtga
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