Ciona intestinalis (yellow sea squirt): 100175941
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Entry
100175941 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100175941
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00600
Sphingolipid metabolism
cin01100
Metabolic pathways
Module
cin_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100175941
Enzymes [BR:
cin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
100175941
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GFIT
Motif
Pfam:
Pyridoxal_deC
Tissue_fac
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
100175941
NCBI-ProteinID:
XP_026692289
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Position
10:complement(2234229..2244971)
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AA seq
871 aa
AA seq
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MVAFQILSWFPAVITSLVVVYFIDILLKRGVVGLFKSFANAILLLPGTNAIVKAFTKKEI
EGFIQKSFTGDAKPHGKLLSIPEKGVPIDQLQKELNELKAGDGNLSENGRLFAYVYTTHG
PRFQLQQEAFKMFSDFSLAKANNDHVSIVKAYLETFMHDNALNPLVFPALRKFENEVVSM
TASMLNGDSGVVGSVTSGGTESILMAMKTYRDMARAVRPSITEPNVVAPSTIHPAFEKAA
HYFNIKIKHVPVSQTSFTPNIHQYEKEIDSNTILLLASAPSYPQAILDPVGEIGKLATKH
NLPLHVDACFGGFMLPWVEKLGAKIPIWDFRVPAVTSISADLHKYGFATKGASVVCYRDS
SIRKHQFFAYSSWSGGLFASPTMAGTRPGGHLAAAWVALRAMGQDGYIDMARKLMETTEK
MKEGVRSIEGLKVLGSPLMTAFGFSTSDESLSIFGIVDVMEEKVPTPRNLRVSAYNLDHE
LQWDAPLSNTSKNRTIGVTYSVRQAVFDEETLKTRWQYIPHCVHVNVTHCYITNITYSPF
ETYEFNVIAEIGNRTSSLDQTITFLPFFDGLLYAPDFIVDVHDNTAILYIPRPPHIHSTG
EVLTNFLYDDVLTYNVQYWTTGSPTPPNATDIVKLTRPATVTNITVRVVGHEPACFRLKL
SGLLFGSAGWSKVRCTTSTPRLLATADKAKHVHTTSSYLTKAVIGIVGGVVFLALAIVCV
KLSRAFLTFIKAKKHRDLPPSLVIVMKQSENDYEVDSYIDTEIVTSLGITPLMTQAKSCT
SSKSNISVSFVEVVSTAGLETRSQVMQTCNNKDNEYVLYIADVERRSNETDDSGGDSTIE
TRSLPDTDACCDAPPVDILPQNSSDHSLYFA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggtggcttttcaaatactttcctggttcccagctgttattacaagcttggttgttgtt
tattttattgatattctattgaaaagaggagttgttggattatttaaatcatttgccaat
gctatcctactgctgcctggcaccaatgcaattgtaaaagcatttactaagaaagagatt
gagggatttattcagaagtctttcacaggtgatgcaaaaccacatgggaaacttcttagt
attccagaaaaaggcgttcccatagatcagttgcaaaaagagctgaatgaattgaaagca
ggtgatggtaatttatccgagaatggaaggttatttgcatacgtttatacaacgcatgga
ccaagattccaactccagcaagaagcattcaaaatgttcagtgatttttcattggctaaa
gcgaacaatgatcatgtctccatcgttaaagcctacctggagaccttcatgcatgacaat
gcgctcaacccactcgtatttcctgctctgagaaaatttgagaacgaagtggtctcaatg
acagcgagcatgttgaacggtgactcgggagtcgtaggaagcgttacatctggaggaaca
gagagcatcctcatggcgatgaagacttatcgggatatggctcgtgcagttcggccgagc
ataactgaaccaaacgtggttgccccatccactatacacccagcatttgaaaaagctgct
cactattttaacataaaaattaaacatgttcctgtgagtcagacctcgtttacccccaac
atacaccaatatgaaaaggaaattgattcaaacactattcttcttcttgcttctgccccc
tcctacccacaagcaattttagacccagttggagaaataggaaagttggcaaccaagcac
aaccttcctttgcatgtagatgcttgctttggtggtttcatgttaccatgggtagagaaa
cttggagcaaaaattccaatatgggattttcgagtcccagctgtcacttcaatctcagcc
gacttacataagtatggcttcgcaactaaaggtgccagtgtggtatgctatagagacagc
agcatacgcaagcatcagttctttgcttattcttcctggtccggtggtttatttgcttct
cccacaatggcgggaactcgaccaggtggccacttggctgcagcctgggttgctctgcga
gcaatggggcaagacggatatattgacatggctcgaaaactgatggagacaactgaaaaa
atgaaggaaggtgttagaagtattgagggattaaaagtactcggctcacctctgatgaca
gcatttggtttttcaaccagcgatgaatctctcagtatttttggaatagttgatgttatg
gaagaaaaagtgccaacaccgcgaaatttgcgcgtgtctgcttacaacttggaccacgag
ttgcaatgggatgcacctttaagcaatacctctaaaaatcgaactattggtgtaacatat
tcggttcggcaggcagtatttgatgaagagactttaaaaacacgctggcaatacatccct
cattgcgtgcatgtgaatgtgacacattgttatataacaaacatcacatattcaccgttt
gaaacatacgaattcaacgtgattgctgaaatcggcaaccgaaccagctccttggaccaa
acgattacgtttttgccgttttttgatggcctactatacgcccctgactttatcgttgat
gtacacgacaacacagcaatactttatatcccaagaccgccacatattcattcaacaggc
gaggttttaaccaactttttatacgatgacgttctcacctataatgtacagtattggaca
acgggttcaccaaccccgccaaatgcgactgatattgtgaaactcacaagacctgcaaca
gttacaaatatcacggttcgtgttgttggtcatgaaccggcttgcttccgtttaaaactg
tccgggctcctgttcggttctgctggctggtcaaaagtccgttgcactacaagtacccca
cggttgctggcaactgcagataaagccaaacatgtacatacaacgtcaagttacttaact
aaagcagtaataggcatagtaggtggagttgtatttctagctcttgcaatcgtatgcgtg
aagctgtcacgggcattcttaacgttcattaaggcgaaaaaacacagggacttaccgcct
tctctggtaattgtgatgaaacaaagcgaaaatgattacgaggtcgattcttatatcgac
accgaaattgtgacgtcacttggtattacccctctgatgacgcaagctaaaagttgtacg
tcatcaaagagcaacatttccgtctcttttgttgaggttgtgtccacggcaggacttgaa
acccgttcccaggttatgcaaacatgtaataacaaagacaatgaatatgttttgtatatt
gccgatgttgagcgaagatcgaacgaaacagacgattctggcggggattcaacgatcgaa
actcggtcgctgccagatacagacgcgtgctgcgacgcacccccggttgacattcttcct
cagaattcgagtgatcacagtttatattttgcataa
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