Ciona intestinalis (yellow sea squirt): 100178372
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Entry
100178372 CDS
T01056
Name
(RefSeq) histone deacetylase 3
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100178372
Enzymes [BR:
cin01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100178372
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
100178372
HDAC complexes
SMART complex
100178372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100178372
NCBI-ProteinID:
XP_002124762
Ensembl:
ENSCING00000002360
LinkDB
All DBs
Position
9:4137044..4138796
Genome browser
AA seq
434 aa
AA seq
DB search
MSEASNNKVAYFYDMDVSRFHYGPGHPMKPHRLALTHTLVLHYGLHNKMQMFKPYRATSH
DMCRFHSEDYINFLQRITPMNLAGFTKNLKLFNVGDDCPVFPGLYDFCSMYTGASLQAAT
MLNNKKSDIAINWSGGLHHAKKYEASGFCYVNDIVIAILELLKYHPRVLYLDIDVHHGDG
VQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSLNVPLKDGINDQAYQQLL
KPIMKAVMQSYQPTCIVMQCGADSLGCDRLGCFNLTIDGHGECVKFMKEFGVPMMVLGGG
GYTVRNVARCWTHETSIIVGQEINDELPYNEYFEYFGPDYTLRPDTSRGIENQNTKQYLD
QLRQMCLESLKMITHAPSVQMHEVPPDLLSFDNYESLSELDVRERQEDVDQRIEPDNEFY
DGEKDNDKESDVSI
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagcaagtaacaacaaagtggcttacttctatgacatggatgtttcacggttc
cactatggccctggtcaccccatgaaacctcaccgtcttgctcttacccacactctagtg
ttgcactatggccttcacaacaagatgcaaatgtttaagccgtaccgcgccactagccac
gacatgtgtagatttcactctgaagattacatcaatttccttcagcgtataacacctatg
aatctagctggtttcacgaaaaacttaaaactgtttaatgtgggcgatgactgtcctgtt
ttccctggtctttatgacttttgctccatgtacactggtgcctctttgcaagcagcgaca
atgcttaataataagaaaagtgatatcgctataaactggtcaggtggtttgcaccatgct
aagaagtatgaagcatctggcttctgttacgtgaatgatatcgtcattgcaattttggaa
cttttaaagtatcaccctagagtattatacctcgacattgatgtacaccacggtgatggt
gtccaagaggctttttatttaacggaccgtgtgatgactgtatcctttcataagtatggc
aattactttttcccaggcactggcgacatgtatgagattggagctgagagtggccgctat
tattcattaaatgtaccacttaaggatggcattaacgatcaggcttatcagcaacttctt
aagcctattatgaaagctgtaatgcagtcataccaacccacttgcattgttatgcagtgt
ggtgcagactcccttggctgtgacagacttggctgcttcaacctgaccatagacggacat
ggagaatgcgtgaagttcatgaaagagtttggcgtcccaatgatggtccttggcggcggt
gggtacactgtacgcaatgtggccaggtgctggacacatgaaacttctatcatagtaggt
caggaaattaatgacgaattaccttataacgaatactttgagtattttggtcctgactac
actcttagaccggacacaagtcgaggtatagaaaaccagaacactaagcagtatcttgat
caactgcgacagatgtgtcttgagagtttaaagatgatcacgcatgctccgagtgttcag
atgcatgaggttcctccggatctgctctcctttgacaactacgagtccctcagtgagttg
gatgtgagagagaggcaagaagacgtggatcagaggattgaaccagataatgagttttat
gacggcgaaaaagacaatgataaagaaagtgatgtcagcatatga
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