Callithrix jacchus (white-tufted-ear marmoset): 100394151
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Entry
100394151 CDS
T03264
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X3
KO
K11101
patched 2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04340
Hedgehog signaling pathway
cjc05200
Pathways in cancer
cjc05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100394151 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100394151 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
100394151 (PTCH2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
MMPL
Motif
Other DBs
NCBI-GeneID:
100394151
NCBI-ProteinID:
XP_002750791
Ensembl:
ENSCJAG00000004303
UniProt:
U3E0M9
LinkDB
All DBs
Position
7:complement(78613155..78633913)
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AA seq
1203 aa
AA seq
DB search
MTRSPPLRELPPNYTPPARTAAPQILAGSLKAPLWLRAYFQGLLFSLGFGIQRHCGKVLF
LGLLAFGALALGLRVAIIETNLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTSR
QEGENILTPEALGLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPKQLLEELGPFASLEGFRELLDK
AQVGQAYMGRPCLHPDDLHCPPSAPNHHSRQAPNVADELSGGCHGFSHKFMHWQEELLLG
GTARNPQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLQAWQRRFV
QLAQEALPENASQQIHAFSSTTLDDILHAFSEVSAARVVGGYLLMLVYACVTMLRWDCAQ
SQGAVGLAGVLLVALAVASGLGLCALLGVTFNAATTQVLPFLALGIGVDHIFLLAHAITE
PLPGTRLQDCMGECLQRTGPSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFV
AVMLVFPAILSLDLQRRHCQRLDVLCCFSSPCSAQVIQILPQELGDRTVPVGIAHLTATV
QAFTHCEASSQHVVTILPPQAHLVPPPSDPLGSELFSPGGSTRDLLGQEEKPRQKAACRS
LPCAHWNLTHFARYQFAPLLLQSQAKAIVLVLFATLLGLSLYGATLVQDGLALTDVVPRG
TKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPATQAPRT
WLHYYRNWLQGIQASFDQDWASGRITRHSYRNGSEDGALAYKLLIQTGDSQEPLDFSQLT
TRKLVDGEGLIPPELFYVGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIP
PAQPLEFAQFPFLLRGLQKTADFVEAIEGARAACAEAGQAGVHAYPSGSPFLFWEQYLGL
RRCFLLAICILLVCTFLVCALLLLNPWMAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVV
ILVASVGIGIEFTVHVALGFLTTQGSRNLRAARALEHTFAPVTDGAISTLLGLLMLAGSN
FDFIVRYFFVVLTVLTLLGLLHGLVLLPVLLSILGPPPEAIQMYKESPEVLTPPAPQGAG
LRWGASPSLPQSFARVTTSMTVAIHPPPLPGAYIHPASDEPPWSPAATSSGDLSSRGPGP
TTG
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgactcggtcgccgcccctcagagagctgccaccgaattacacacccccagctcgaacc
gcagcacctcagatcctagctgggagcctgaaggctccactctggcttcgtgcttacttc
cagggcctgctcttctctctgggcttcgggatccagagacactgtggcaaagtgctcttc
ctgggactgctggcctttggggccctggcattaggtcttcgcgtggctattattgagaca
aacctggaacagctctgggtagaagtgggcagccgggtgagccaggagctgcattacacc
aaggagaagctgggggaggaggctgcatacacctctcagatgctgatacagacctcacgc
caggagggagagaacatcctcacccctgaagcacttggcctccacctccaggcagccctc
actgccagtaaagtccaagtatcactctatgggaagtcctgggatttgaacaaaatatgc
tataagtcaggagttcctcttattgaaaatggaatgattgagcggatgattgagaagctg
tttccgtgcgtgatcctcacacccctcgactgcttctgggagggagccaaactccaaggg
ggctccgcctacctgcctggccgcccggatatccagtggaccaacttggatccaaagcag
ctgctggaggagctgggtccctttgcctctcttgagggcttccgggagctgctagacaag
gcacaggtgggccaggcctacatggggcggccctgtctgcaccctgacgacctccactgc
ccacctagtgcccccaaccatcacagcaggcaggctcccaatgtggctgacgagctcagt
gggggctgccatggcttctcccacaaattcatgcactggcaggaggaattgctgctggga
ggcacggccagaaacccccaaggacagctgctgagggcagaggccctgcagagcaccttc
ttgctgatgagtccccgccagctgtacgagcatttccggggtgactatcagacgcatgac
ataggctggagcgaggagcaggctggcacagtgctacaagcctggcagcggcgctttgtg
cagctggcccaggaggccctgcctgagaacgcttcccagcagatccacgccttctcctcc
accaccttggatgacatcctgcatgcattctctgaagtcagtgctgcccgtgtggtggga
ggctacctgctcatgctggtctatgcctgtgtgaccatgttgcggtgggactgtgcccag
tcccagggtgccgtgggcctcgctggggtgctgctggtggccctggcggtggcctcaggc
cttgggctctgtgccctgctcggcgtcaccttcaatgctgccactacccaggtgctgccc
ttcctggctctgggaatcggtgtggatcacatattcctgctggcacatgccatcacagag
cctctgcctggcacccgtctccaggactgcatgggcgagtgtctgcagcgcacgggcccc
agtgtggtcctcacatccatcaacaacatggccgccttcctcatggctgccctcgttccc
atccctgcactgcgagccttctccctgcaggcggccatagtggttggctgcacctttgta
gccgtgatgcttgtcttcccagccatcctcagcctggacctacagcggcgccactgccag
cgcctagatgtgctctgctgcttctccagtccctgctctgctcaggtgattcagatcctc
ccccaggagctgggggacaggacagtaccagtgggcattgcccacctgacggccacagtt
caagcctttacccactgtgaagccagcagccaacatgtggtcaccatcctgcctccccaa
gcccacctggtgcctccaccttctgacccactgggctctgagctcttcagccctggaggg
tccacacgggaccttctaggccaggaggagaagccaaggcagaaggcagcctgcaggtcc
ctgccctgtgcccactggaatcttacccactttgcccgatatcagtttgcccccttgctg
ctccagtcacaggccaaggccatcgtgctggtgctttttgccacacttttgggcctgagc
ctctacggagccacactggtgcaagacgggctggccctgacggatgtggtgcctcggggc
accaaggagcatgccttcctgagcgcccagctcaggtacttctccctgtatgaggtggcc
ctggtgacccagggtggcttcgactacgcccactcccaacgtgccctctttgatctgcac
cagcgcttcagttccctcaaggccgtgctgcccccaccggccacccaggcaccccgcacc
tggctgcactattaccgcaactggctacagggaatccaggcttcgtttgaccaggactgg
gcttctgggcgcatcactcgccactcgtaccgcaatggctctgaggatggggccctggcc
tacaagctgctcatccagaccggagactcccaggagcctctggatttcagccagctgacc
acaaggaaactggtggacggagagggactgattccacccgagctcttctatgtggggctg
actgtgtgggtgagcagtgaccccctgggtctggcagcctcacaggccaacttctacccg
ccacctcctgaatggctgcatgacaaatacgacaccacaggggagaaccttcgcatcccg
ccagctcagcccttggagtttgcccagttccccttcctgctgcggggcctccagaagact
gcagactttgtggaggccatcgagggggcccgggcagcatgtgcagaggcgggccaggct
ggggtgcacgcctatcccagtggctcccccttcctcttctgggagcagtatctgggattg
cggcgctgcttcctgctggccatctgcattctgctggtgtgcactttcctcgtctgtgcc
cttctgctcctcaacccctggatggctggcctcatagtgctggtcctggcgatgatgacc
gtggagctgtttggtatcatgggtttcctgggcatcaagctgagcgccatccctgtggtg
atcctcgtggcctctgtaggcattggcattgagttcacagtacatgtggctctgggcttc
ctcaccacccagggtagccgaaacctgcgggctgcccgtgctctggagcacacatttgcc
ccagtgaccgatggggccatctctacattgctgggtctgctcatgcttgctggttccaac
tttgacttcattgtaaggtacttctttgtggtgctgacagtgcttacactcctcggcctc
ctccacggacttgtgctgctgcctgtgctgctgtctatcctgggcccgccaccagaggcg
atacagatgtacaaggaaagccctgaggtcctgactccaccagctccacagggagcgggg
ctgaggtggggggcgtccccctccctgccccagagctttgccagagtgactacctccatg
accgtggccatccacccacccccgctgcctggtgcctacatccacccagcctctgatgag
cccccttggtcccctgctgccaccagctctggcgacctcagttccaggggaccaggtcca
accactgggtga
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