Chiloscyllium plagiosum (whitespotted bambooshark): 122541931
Help
Entry
122541931 CDS
T08871
Symbol
sgpl1
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00600
Sphingolipid metabolism
cpla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122541931 (sgpl1)
Enzymes [BR:
cpla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
122541931 (sgpl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
DegT_DnrJ_EryC1
SepSecS
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
122541931
NCBI-ProteinID:
XP_043535102
LinkDB
All DBs
Position
38:complement(26216392..26288310)
Genome browser
AA seq
565 aa
AA seq
DB search
METRETLDVYKETIWLYLGKGKKYVNAHCQGLEPWQIIAITAVTTLLGVWLYGFLFQQQS
IPSRLKKFFFKIVRKLPFLAAAVQKQLNKALDDLSTSVLTLKDGTTYITSLPAQGLAESE
LLLKLKDYSTMGEVHWEKGQVSGTVYSGEEQLTKLMVKVYGDFAWSNPLHPDIFPGVRKM
EAEVVRMACTLFRGGPESCGTVTSGGTESILMACKAYRDLGSERGVKYPEIVAPKSAHAA
FDKAAQYFGMKIVHVELDKTTMQVDVKAMKKAISRNTVMLVCSVPQFPHGIMDPVEEVAK
LAVDYDIPLHVDACLGGFLIVFMEKAGYSLPPFDFRVKGVTSISADTHKYGYAPKGSSVV
LYSNKKYRHYQFFVAPDWQGGIYASPTIAGSRPGGIIAACWATMMYMGEDGYVKATKKII
DTARYIEAQLKKIKEIFIFGKPEVSVVAIGSQTFDIFRLSNLMTSKGWNLNTLQFPSSIH
ICVTLLHTKNGVADQFVEDLRESVAEIMKNPGEKTTGRGAIYGMAQSIPDRTLVTEISHG
FLDCLYSTELPKVEKNCMNGASAQH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcgggaaacactggatgtgtacaaagagacaatatggctgtatctgggaaag
ggaaagaagtacgttaatgcacattgccaaggcctggagccctggcagatcatcgccatc
actgctgtgaccactctgctgggagtgtggctctatggatttctattccaacagcaaagt
attccctcaagacttaaaaagttctttttcaaaattgtaagaaaactgccatttctggct
gctgcagtacagaaacaacttaacaaggcactggatgacctttctacaagcgtcttaaca
cttaaggatggaacgacatacattacgtccctgcctgcacagggcttggcagagtctgag
ctgctgttaaagcttaaagactacagcacaatgggagaggtacattgggagaaagggcaa
gtctctgggacagtgtatagtggtgaggaacagctcacaaagctgatggtgaaggtttat
ggagactttgcttggagtaacccactacatccggacatcttccctggtgtgaggaagatg
gaagcggaggttgttcgaatggcttgtactctcttccgaggggggccagaatcctgcggc
acggtgacatctggtgggactgaaagcatccttatggcttgcaaagcttacagagacctt
ggatctgagcgaggagtgaaatatcctgaaattgtcgctcccaaaagtgctcatgctgct
tttgacaaggctgctcagtattttgggatgaaaatagtacatgtagaacttgacaaaacc
acaatgcaagtagacgtgaaggccatgaagaaagccatttcgaggaacacagtcatgttg
gtctgttcggtgccacagtttccccatggtatcatggacccagtggaggaagttgccaag
cttgctgtggattacgatatccctttacatgtagatgcttgtctgggaggctttcttatt
gtcttcatggagaaagctggttactcactgccaccctttgactttcgtgttaagggagtg
acgagcatctctgctgacacacacaagtacggctatgctcccaaaggttcttcagttgtt
ctgtacagcaacaagaagtaccgtcactaccaattctttgtggccccggactggcaggga
ggaatctatgcatcacccacaatcgctggatcgagaccaggggggatcattgctgcttgc
tgggccaccatgatgtacatgggtgaggacggttacgttaaggccacgaagaagatcatt
gatactgcacgatacattgaagcacagttgaagaaaataaaagaaattttcatctttgga
aaacctgaagtgtctgtagtggccattggctcacaaacgttcgacattttccgtctatca
aacttaatgacgtcgaaaggatggaacctcaacactttgcagttcccttcgagcattcac
atatgtgtgacacttctgcacaccaagaatggagtggctgaccagtttgttgaggatctt
cgtgaaagtgtggctgaaatcatgaagaatcctggcgagaaaaccactggcaggggtgct
atatatggcatggcacagtcaattcctgatcgtacactggtgacagagatatcgcatgga
ttcctagactgcctctacagcactgagctccccaaagttgagaaaaactgcatgaatgga
gcatcagcacagcattga
DBGET
integrated database retrieval system
