Chiloscyllium plagiosum (whitespotted bambooshark): 122549339
Help
Entry
122549339 CDS
T08871
Name
(RefSeq) exostosin-1-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
cpla
Chiloscyllium plagiosum (whitespotted bambooshark)
Pathway
cpla00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cpla01100
Metabolic pathways
Module
cpla_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cpla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
122549339
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cpla01003
]
122549339
Enzymes [BR:
cpla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
122549339
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
122549339
Glycosyltransferases [BR:
cpla01003
]
Glycan extension
O-Glycan
122549339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin
Motif
Other DBs
NCBI-GeneID:
122549339
NCBI-ProteinID:
XP_043544923
LinkDB
All DBs
Position
4:113011610..113169176
Genome browser
AA seq
744 aa
AA seq
DB search
MQAKKRYLLLSAGAGLLLLIYLAGVRFGRLSAARRQSRRWAAADGSPSAPDRWPEWSNSL
QSFSVGDQPENEEFSQRGSPRHKREINTSVYKGKKCRMDSCFDFSLCHKNGFKVYVYPQQ
KGEKMSESYQNILAAIENSKFYTSDPRQACLFVLSLDTLDRDQLSPQYVHNLKTKVQSLY
LWNNGRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTENFRSNFDVSIPLFSKEHP
RTGGEKGYMLFNNIPPLRKYLLVFKGKRYLTGIGSDTRNALYHVHNAEDIVLLTTCKHGK
DWQKHKDARCDKDNSEYERYDYREMLHNSTFCLVPRGRRLGSFRFLEALQAACIPVMLSN
GWELPFSEVIDWNQAIVVGDERLLLQIPSTIRSINHDKILALKQQTQFLWEAYFSSVERI
VLTTLEIIQDRILNHISRNGLIWNKPPGGLFSQPQYSTHLGDFPFYYSYLGIKPSSKFTA
VIHVVTPLVSQSQPILKLLVAVAKSQYCAQVIVLWDCDKPLPAKHRWPSTTVPVLVIEGE
NKVMSSRFLPYDAINTHAVLSLDEDTVLSTTEVDFAFIVWQSFPERIVGYPARSHFWDST
KERWGYTSKWTNDYSMVLTGAAFYHRYYHYLYTHYLPSSLKNMVDQLANCEDILMNFLVS
AVTKLPPVKVTQKKQYKETMMQQSSRASRWADPDHFAQRQTCMNTFATWFGFMPLIHSQM
RLDPVLFKDQVSILRKKYRDIERL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgctaccttctgttgtcagccggcgccggtctgctgttgctcatc
tacctggcaggagtgcggttcgggcggctgtccgcagcgaggaggcagagccggcggtgg
gctgcggccgatggctccccgtcggctcccgaccgctggcctgagtggtccaattcactg
cagagtttctcggtcggggaccagcccgagaatgaagagttcagtcaacgcggctccccc
cggcacaagagggagattaacaccagtgtctacaagggcaagaagtgccgcatggactct
tgcttcgacttctctctctgtcacaaaaacggtttcaaagtctacgtctacccgcagcag
aaaggggagaaaatgtccgaaagttaccaaaacatcctggcagccatcgagaactctaag
ttttatacctcggacccgagacaggcttgtctcttcgtgctaagtttggacactttagat
cgcgatcagctttcgcctcagtacgtacataacctaaaaactaaagttcagagtctgtac
ttgtggaacaatggcaggaaccatttgatttttaatctctattctggaacttggcccgat
tacacggaggacctgggattcgatatcggccaggcgatgttggctaaagccagcatcagt
actgaaaattttagaagcaattttgacgtttccataccgctcttttctaaagagcaccca
aggaccggaggcgaaaagggttatatgcttttcaataacatccctcccctgcgaaagtac
ttactggtatttaaagggaaaaggtatttgactggcataggttctgataccaggaatgcc
ttatatcatgtccataacgcagaggatattgtcctcttaacaacctgtaaacatggaaaa
gactggcagaaacataaggatgcccgctgtgacaaagacaacagtgaatatgaaaggtat
gattatcgtgaaatgttacacaattccactttctgtttggttccacgtggccgtagattg
ggatctttccggtttctggaggctttacaggctgcatgtattccagtgatgctaagtaat
ggatgggagctgccattttcagaagtaattgactggaaccaagctattgtcgttggggat
gaaaggttattgctgcagataccttcaacaataaggtctattaaccatgacaaaatccta
gcacttaagcaacagacacaattcttatgggaagcatatttttcttcagttgagaggata
gtattgactacattagaaataattcaagatcgaattcttaaccatatatctcgcaatggt
ttaatttggaataaacctccagggggattatttagtcaaccacagtattcaacgcatcta
ggagattttcctttttattattcttatttaggtataaagccttcatctaagtttactgcg
gttatccacgtagtgactccgctggtttcgcagtcacagccaatattaaagctcctagta
gctgttgctaagtcccaatattgtgcccaggttattgtgttatgggactgtgacaaacct
ttgccagccaaacatcggtggccctccactactgtccctgtgttggtaattgaaggggaa
aataaagttatgagtagtcgttttcttccctatgatgccatcaatacgcatgcagtactt
agccttgatgaagacactgttctttctaccactgaggtggattttgccttcattgtgtgg
caaagcttccctgaaagaattgtgggatacccagctcgcagtcatttctgggacagcaca
aaagaaagatggggttacacatctaaatggaccaatgattactctatggtcctaacaggc
gctgctttctaccataggtactaccattacctgtacactcattatctgccttccagtcta
aaaaacatggtggatcaactggccaactgtgaagacatattgatgaacttcttggtttca
gctgtcaccaagctgcctcctgttaaagtcactcagaaaaaacagtataaagagacaatg
atgcagcagtcctccagagcttcccgatgggctgatcctgatcattttgctcagcgacaa
acctgcatgaacacgtttgcaacttggtttggattcatgcctttgatccactcccagatg
cgactagatccagttctcttcaaagatcaggtctccatactgcgaaagaagtatcgggac
attgagcggctctaa
DBGET
integrated database retrieval system
