Caenorhabditis remanei (nematode): GCK72_016360
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Entry
GCK72_016360 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
crq
Caenorhabditis remanei (nematode)
Pathway
crq00600
Sphingolipid metabolism
crq01100
Metabolic pathways
Module
crq_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
GCK72_016360
Enzymes [BR:
crq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
GCK72_016360
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
SepSecS
Motif
Other DBs
NCBI-GeneID:
9808419
NCBI-ProteinID:
XP_003096219
UniProt:
E3N5Y0
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Position
IV:complement(25719047..25721606)
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AA seq
552 aa
AA seq
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MDSVKHSAEVIVDLTKMHYHMVNDRLSRYDPAVLVLAAFGGTLVYTKVVHLYRKSEDPIL
KRLGAYVFSLLRKIPSVRDKIEKELSAEKPKLIESIHKDDKDRQFIATLPISPLSQESIL
ELADKYEKYNTFNIDGGRVSGAVYTNRHVEHVALLGKIYEKYAFSNPLHPDVFPGARKME
AELIRMVLNLYNGPEDSSGSVTSGGTESIIMACFSYRNRAHSMGIEDPVILAGKTAHAAF
DKAAHLCGMRLRHVPVDENNRVDLKAMEKLIDSNVCVLVGSAPNFPSGTVDPIPEIAKLG
EKYGIPVHVDACLGGFMIPFMNDAGYLLPVFDFRNPGVTSISCDTHKYGCTPKGSSIVMY
RSKELHHFQYFSCPDWCGGIYATPTIAGSRAGANTAVAWATLLSFGRDEYVRRCAQIVKH
TRMLAEKIKTIPYVKPYGSSDVSLVAFSGNGVNIYEVSDKMMKLGWNLNTLQNPSAIHIC
LTINQAREEVVNQFVADLKTTCDEVAAAGNEKPNQGMAAMYGMAAQVPKSVVDEVIALYI
DATYSAPPGNNN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggattcggtaaagcattcggccgaggtgatagtggatttgacaaaaatgcactatcat
atggttaatgacagactctcccgctacgacccggctgttcttgtgctcgccgcattcggt
ggaacccttgtctacacaaaagtcgtccatttgtaccgaaagagtgaggatccgattttg
aaacgtttgggcgcctacgtgttctcgctgctccgtaagattccatcggttcgcgacaaa
attgaaaaagagttgtcagcggagaagccgaaattgattgagtcgattcataaggatgat
aaggatcgccaatttattgccacgctcccgatctccccgttatcccaggagtcaattcta
gagctcgccgataaatacgagaaatacaatacatttaatatcgatggcggccgagtttcc
ggcgcggtttacacgaatcgccacgtggaacacgtcgcattactcggaaaaatttatgag
aaatacgcattttccaacccattgcatccggatgtgttcccgggagcccgtaaaatggag
gcggagcttatccggatggttttgaacctttataacggaccggaagactcatcgggaagt
gtgacttctggaggaacggaaagtatcattatggcatgtttctcgtacagaaatagagct
cactcgatgggaatcgaagatccggtgattctggctggaaagaccgcccatgctgcgttc
gataaggccgcccatttatgcggaatgcgtcttagacacgtgccggttgatgagaataac
cgagtggacttgaaggcgatggaaaaattgattgactcgaatgtttgtgttcttgtggga
agtgcaccgaatttcccatcgggaaccgtggatccgattccggagattgcgaagctcggc
gagaaatatggaatcccagtgcatgtggacgcgtgtctcggcggtttcatgattccattc
atgaacgacgccggctatcttctcccagtttttgacttcagaaatcccggtgttacctcg
atttcctgtgatacacataaatatggttgcactccaaaagggtcgtctatcgtaatgtac
cgttccaaggagcttcatcacttccaatatttctcgtgtccagactggtgtggtggtatt
tacgccacgcccactatcgcgggatcccgtgctggagccaacactgctgtcgcctgggcc
acgttgctttccttcggacgtgatgaatacgtgagacgatgtgcccaaattgtgaagcat
accagaatgttggctgagaaaatcaagacgatcccatacgtgaaaccgtatggaagctcg
gatgtgtcacttgtagcgttcagtggaaatggagtgaatatctatgaagtttcggataag
atgatgaagttgggatggaatttgaatacactacagaatccgtcggccatccacatctgc
ctaaccattaatcaggcacgtgaagaagtggtcaatcagttcgtcgccgacctgaaaacc
acttgcgacgaggttgccgccgctggaaacgagaaaccgaatcaaggaatggcggcgatg
tacggaatggccgcccaagtgccgaaatctgtagttgatgaagtcattgcactgtatatc
gatgccacgtactccgcaccgccaggaaacaacaattaa
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