Synechococcus sp. JA-3-3Ab: CYA_0940
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Entry
CYA_0940 CDS
T00318
Symbol
hup-2
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
cya
Synechococcus sp. JA-3-3Ab
Brite
KEGG Orthology (KO) [BR:
cya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cya03032
]
CYA_0940 (hup-2)
03036 Chromosome and associated proteins [BR:
cya03036
]
CYA_0940 (hup-2)
03400 DNA repair and recombination proteins [BR:
cya03400
]
CYA_0940 (hup-2)
DNA replication proteins [BR:
cya03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CYA_0940 (hup-2)
Chromosome and associated proteins [BR:
cya03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CYA_0940 (hup-2)
DNA repair and recombination proteins [BR:
cya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CYA_0940 (hup-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ABC99142
CyanoBase:
CYA_0940
UniProt:
Q2JVT9
LinkDB
All DBs
Position
951098..951415
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AA seq
105 aa
AA seq
DB search
MNKAELVDAVAHRANVTKKEAEAVLTAALEIIVEEVASRDENGEPKGKVTLVGFGSFEAR
KRKQREGRNPKTNEKMVIPASIVPTFTAGKTFRDAVAGGHKSSGV
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagcttgtggatgccgtcgctcatcgcgccaacgtaaccaaaaaagaa
gctgaagctgtcctgacggcggcgctggagatcattgtcgaagaggtcgcatcccgcgat
gaaaacggtgaacccaaaggaaaggtgaccctggtgggcttcggctcctttgaggcccgc
aagcgcaaacaacgggaaggtcgcaacccgaagaccaacgagaagatggtgatcccagcc
agcattgtcccgactttcactgcaggcaaaactttccgcgatgcggtggcaggtggccac
aagtcttcgggagtttga
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