Dermochelys coriacea (leatherback sea turtle): 119857312
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Entry
119857312 CDS
T09064
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Pathway
dcc04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
119857312 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcc04121
]
119857312 (RAG1)
Enzymes [BR:
dcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119857312 (RAG1)
Ubiquitin system [BR:
dcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119857312 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
119857312
NCBI-ProteinID:
XP_038262010
LinkDB
All DBs
Position
6:47893934..47902631
Genome browser
AA seq
1047 aa
AA seq
DB search
MDVLTSPSTGLHTIPEEIQYPYTKFSEWKFKLFKVRSFEKAPSVDNQIANKEKAEKEASL
DKGTLVQMDVAVPMAEKPLLADTDLNHNKQALEKDADNLKIQENAAHQANLQQLCRICGV
SFKTDRYKRSYPVHGPVDCETQGLLRKKEKRATSWPDLIAKIFKIDVRGDIDTIHPTRFC
HNCWSIIHRKFSNAPCEVYFPRNSTMEWKSHSSNCTVCYTARRGVKRKNQPSNLQLGKRL
KIIAERARKTKGVKKQVQVNNKNLMKKIANCKKIHLSTKLLAVDYPADFVKSISCQVCEH
ILADPVETTCSHLFCRTCILKCIKVMGSYCPICRYPCFPTDLVSPVKSFLNILNSLAVRC
PVKECDEEVLLGKYCHHLSSHKEVKRKEIYMHVNKGGRPRQHLLSLTRRAQKHRLRELKL
QVKAFAEKEEGGDIKAVCLTLFLLALRARNEHRQADELEAIMQGKGSGLHPAVCLAIRVN
TFLSCSQYHKMYRTVKAITGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVG
IIDGLSGLPHSVDDYPVDTIAKRFRYDAALVSALMDMEEDILEGMKAQELDDYLNGPFTV
VVKESCDGMGDVSEKHGSGPVVPEKAVRFSFTLMNITIAHGNENVRIFEEVKPNSELCCK
PLCLMLADESDHETLTAILSPLIAERETMKSSILLLEMGGILRTFKFIFRGTGYDEKLVR
EVEGLEASGSTYICTLCDATRLEASQNLVLHSITRSHAENLERYEVWRSNPYNESVDELR
DRVKGVSAKPFIETVPSIDALHCDIGNAAEFYKIFQFEIGEVYNNPDISKEERKRWQSTL
DKHLRKKMNLKPIMRMNGNFARKLMTKETVEAVCELIKCEERHDALRELMDLYLKMKPVW
RSSCPGKECPELLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSI
GAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNTLKSQG
FTIDPGQSFEDSLPLEDSLEMTDSMEF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgctgacatcaccaagcacgggcttgcacaccataccagaagaaatccagtac
ccgtatactaaattttctgaatggaagttcaagctgtttaaagtgagatcatttgaaaaa
gcaccttctgtggacaaccaaatagcaaataaagagaaagcagagaaggaggcttctttg
gacaaaggcactctggtgcagatggatgtggcagttcccatggcagaaaagccacttctg
gcagatacagacttaaatcacaataagcaggctcttgaaaaagatgctgacaacctgaaa
atacaagagaatgcagctcatcaagcaaacctgcagcagctctgccgcatctgtggagtt
tcatttaaaactgatcgctacaagagaagttatccagtgcatggaccagtggactgtgaa
actcagggacttctgagaaagaaagagaaaagagcaacatcttggccggatcttattgcc
aagatttttaagattgacgtgcgaggagatatcgacacaatccaccccactcggttttgt
cacaactgctggagcatcatccacagaaagttcagcaatgccccatgtgaagtgtatttc
ccgaggaacagcaccatggagtggaagtcccactcctcaaactgcactgtttgttatact
gctcgtcgtggggtcaagagaaagaaccagccatccaatttacagctgggcaaaaggctc
aagatcattgcagaacgtgcccgaaaaactaaaggtgtaaaaaaacaagtacaggtgaac
aacaaaaaccttatgaaaaagattgccaactgcaagaagatacatcttagcaccaaactt
ctagcagttgactaccctgcagatttcgttaagtccatctcttgccaggtctgtgagcat
attctggcagacccagtggaaacaacatgtagccacttattctgtagaacctgcatcctt
aagtgcatcaaagttatgggcagctattgtcccatctgccgatacccttgcttccctacc
gacctggtgagtccagtgaaatccttcctgaacatcctcaattccctggctgtgcgatgc
ccagtgaaagaatgtgatgaggaggttttgctgggcaaatactgccatcatttgtccagc
cacaaagaggtgaaaaggaaagagatttacatgcatgtaaataaaggtggccgaccaagg
caacatttactctcattgaccaggagagcgcaaaagcatcgtctgagagaactcaagctt
caagtcaaagcttttgctgagaaagaagaaggaggtgatataaaggctgtgtgcctaact
ttgttcctgctggctctgagagcaagaaatgaacacagacaagcagatgagttggaagct
ataatgcaaggaaagggatcagggcttcacccagctgtttgcctggcaatccgagtcaac
acctttctcagctgtagccagtaccataaaatgtacagaacggtaaaagctataactggg
aggcagatcttccagccattgcatgctctccgcactgctgagaaggcactcttgccaggt
tatcatccatttgagtggaaaccccccttgaaaaatgtgtccactaatacagaagtggga
attatagatgggctgtcaggcctgccacactcagttgatgactacccagtagacacgatt
gccaagaggtttcgatatgatgcagccttggtttctgccttaatggacatggaggaagac
attttggaaggcatgaaagcacaagagctggatgactacttgaatggcccattcactgtt
gtggtgaaggaatcttgtgatgggatgggagatgtcagcgagaagcatggaagtggacca
gttgtccctgaaaaggcagttcgattttctttcacactcatgaacatcactatagctcat
ggtaatgaaaatgtaaggatctttgaagaagtcaagcccaattcagagctgtgttgcaag
cccttgtgccttatgctggctgatgaatcggaccacgagactctgacagccatcctgagc
cctctcatagcagaaagagagaccatgaaaagcagcattctgcttcttgaaatgggaggc
atcctcagaacattcaaattcatctttaggggtacggggtatgatgagaaacttgtccgt
gaagtggaaggccttgaagcctcaggctctacttacatatgtacgctttgtgatgcaacc
cgcctggaagcctctcagaacttggtcctccactccataacaagaagtcatgctgaaaac
ctggagcggtatgaagtatggaggtccaacccatataatgaatctgttgatgagttacgt
gacagagtgaagggtgtttctgccaaaccttttattgagactgttccttccatagatgca
ttgcattgtgacatcggcaatgcagctgagttctacaagatattccagtttgagataggt
gaggtgtacaataaccctgacatatctaaagaagagaggaagaggtggcagtcgactctt
gacaagcaccttaggaagaagatgaacctgaagcccataatgaggatgaatggaaacttt
gctagaaagcttatgaccaaagagacagtggaagcagtatgtgaattaataaagtgtgag
gaaaggcatgatgcactaagagaactgatggacctttaccttaagatgaaaccagtgtgg
aggtcttcatgcccaggcaaagagtgcccagaattgctgtgtcagtatagcttcaattca
caacgttttgctgagctcctgtccacaaagttcaagtacagatatgagggcaagattacg
aattattttcacaaaactcttgctcatgttcctgaaattattgaaagagatggctccatt
ggtgcctgggcaagtgaagggaacgagtctggaaacaaattatttaggcgtttccgaaaa
atgaatgccaggcagtcaaaatgctacgaaatggaggatgtcttgaagcaccactggctg
tatacatctaagtacctgcagaaattcatgaatgcccataatacattgaaaagccagggc
ttcacaatcgatccagggcagagttttgaagactctctgccattggaagactctttagaa
atgactgattctatggaattctaa
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