Equus caballus (horse): 100052702
Help
Entry
100052702 CDS
T01058
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
ecb
Equus caballus (horse)
Pathway
ecb04340
Hedgehog signaling pathway
ecb05200
Pathways in cancer
ecb05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100052702 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100052702 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
100052702 (PTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
100052702
NCBI-ProteinID:
XP_001496607
Ensembl:
ENSECAG00000000541
VGNC:
21980
LinkDB
All DBs
Position
2:13624823..13644782
Genome browser
AA seq
1207 aa
AA seq
DB search
MARPPPLGELPPGYTPPAQPAAPQILVGSLKAPLWLRAYFQSLLFSLGCGIQRHCGKVLF
LGLLAFGALALGLRVAIIETDLEQLWVEVGSRVSQELHYTKEKLGEEAAYTSQMLIQTPR
QEGENVLTPEALGLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDK
AQVGQAYVGRPCLHPDDLHCPPSAPNHHSRQPPNVAQELSGGCHGFSHKFMHWQEEVLLG
GTARGSQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLQAWQRRFV
QLAQEALPGNASQQIHAFSSTTLDDILHAFSEVSAARVVGGYLLMLAYACVTMLRWDCAR
SQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALGIGVDDIFLLAHAFTE
APPGTPLQERTGECLQRTGTSVTLTSVNNMVAFFMAALVPIPALRAFSLQAAIVVGCNFA
AVMLVFPAVLSLDLHRRHCQRLDVLCCFSSPCSARVIQILPQELEDRTVPVGIAHLTATV
QAFAHCEANSQHVVTILPPQAHLVPPPSDPLGSELFSPGGSTRDLLGQEEGTRQKAACKS
LPCARWNLAHFARYHFAPLLLQSHTKAMVLVLFGALLGLSLYGATLVQDGLALTDVVPRG
TKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPATQAPRT
WLHYYRNWLQGIQAAFDQDWASGRITRHSYRNGSEDGALAYKLLIQTGDVQEPLDFSQLT
TRKLVDKEGLIPPELFYLGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIP
AAQPLEFAQFPFLLHGLQKTADFVEAIKGARAACAEAGRAGVRAYPSGSPFLFWEQYLGL
RHCFLLAVCILLVCTFLVCALLLLNPWTAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVV
ILVASVGIGVEFTVHVALGFLTTQGSRNLRAARALEHTFAPVTDGAVSTLLGLLMLAGSN
FDFIIRYFFVVLTVLTLLGLLHGLVLLPVLLSILGPPPEVVQLYKESPEVLSPPAPRVGG
LRWGMSPTLPQSFARVTTSMTVALHPPPLPGAYIHPASDEPTWSPAAIPAASSSSNLSSR
GLCPTTG
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccgccgcccctcggggaactgcccccgggctacacacccccagctcaaccc
gcagcaccccagatcctagttgggagcctgaaggctccactctggcttcgtgcttacttc
cagagcctgctcttctctctgggctgcgggatccagagacactgtggcaaagtgctcttc
ctgggactgttggcctttggggccctggcactgggtctccgagtggccatcattgagaca
gacctagaacagctctgggtggaagtgggcagccgggtgagccaggagctgcattacacc
aaggagaagctgggggaggaggctgcgtacacctcccagatgctgatacagactccccgc
caggaaggggagaatgttctcacgcctgaggcacttggcctccacctccaggcagccctc
actgccagtaaagtgcaagtatcactctacggaaagtcctgggatttgaacaaaatctgc
tacaaatcaggagtccccctaattgaaaatggaatgattgagcggatgattgagaagctg
tttccgtgcgtgatcctcactcccctcgactgtttctgggagggagccaagctccaaggg
ggctctgcctacttgccgggtcgccccgacatccagtggaccaacctggatccagagcag
ctgctagaggagctgggcccctttgcttcccttgagggcttccgggagctgctagacaag
gcacaggtgggccaggcctacgtggggcggccctgtctgcaccctgatgacctccactgc
ccgcctagtgcccctaaccatcacagcaggcagcctcccaatgtggctcaggagttgagt
gggggctgccacggcttctcccacaagttcatgcactggcaggaagaagtgctgctggga
ggcacggccaggggctcccaaggacagctgctgagggcagaggccctgcaaagtaccttc
ctgctaatgagtccccggcagctgtatgagcacttccggggcgactaccagacacatgac
attggctggagcgaggagcaggctggcacagtgctgcaggcctggcagcggcgctttgtg
cagctggcccaggaggccctgcctgggaatgcatcccagcagatccacgccttctcctcc
actaccctggatgacatcctgcacgccttctctgaagtcagtgctgcccgtgtggtcgga
ggctatctgctcatgctggcctatgcctgcgtgacgatgctgcgatgggactgtgcccgg
tcccagggtgctgtgggccttgccggggtgctgctggtggccctggccgtggcctcaggc
cttgggctctgtgccctgctcggcatcgccttcaatgctgccactacccaggtgctgccc
ttcttggcactgggcatcggcgtggatgacatcttcctgctggcacatgccttcacagag
gctccacctggcacccctcttcaggagcgcacaggtgagtgtctgcagcgcaccggcacc
agcgtcacactcacgtccgtcaacaacatggttgcgttcttcatggccgccctggttccc
atccctgcactgcgggccttctccttgcaggcagccatagtggttggctgcaactttgca
gccgtgatgcttgtcttcccagcagtcctcagcttggacctgcaccggcgccactgccag
cgccttgatgtgctctgctgcttctctagcccctgctctgctcgggtgattcagattctg
ccccaggagctggaggataggacagtaccagtaggcattgcccacctgactgccacagtt
caagcctttgcccactgtgaagccaacagccagcatgtggtcaccatcctacccccgcaa
gcccacctggtgcccccaccttccgacccactgggctctgagctcttcagcccaggaggg
tccacaagggaccttctaggccaggaggaggggacaaggcagaaggcggcctgcaagtcc
ctgccctgtgcccgctggaatcttgcccatttcgcccgctatcactttgcacccttgctg
ctccagtcacacaccaaggccatggtgctggtgctttttggggctcttctgggcctgagc
ctctacggagcaaccttggtgcaggatgggctggccttgacagatgtggtgcctcggggc
accaaggagcatgccttcctgagcgcccagctcaggtacttctccctgtatgaggtggcc
ctggtgacacagggtggctttgactacgcccactcccaacgcgccctctttgatctgcac
cagcgcttcagttccctcaaggccgtgctgcccccgcctgccacccaggcgccccgcacc
tggctgcactattaccgcaactggctacagggaatacaggctgcatttgaccaggactgg
gcttctgggcgcatcacccgtcactcataccgcaatggctctgaggatggggccctggcc
tacaaactgcttatccagactggggatgtccaggagcctctggattttagccagctgacc
acgagaaagctggtggacaaggaggggctaattccaccggagctcttctacctggggctg
accgtgtgggtgagcagtgaccccctaggtctggcagcctcacaggccaacttctacccc
ccacctcctgagtggctgcatgacaagtacgacaccaccggggagaaccttcgcatcccg
gcggcccagcccctggagtttgcccagttccccttcctactgcatggcctccagaagact
gcagacttcgtggaggccatcaagggggcccgggcagcgtgtgccgaggcaggccgggct
ggggtgcgtgcctaccccagcggctcccccttcctcttctgggagcagtatctgggcctg
cggcactgcttcctgctggctgtttgcatcctgttggtgtgcactttcctcgtctgtgcc
ctgctgctgctcaacccctggacagctggcctcatagtgctggtcctggcgatgatgact
gtggagctctttggcatcatgggtttcctgggcatcaagctgagcgccatccctgtggtg
atccttgtggcttctgtaggcattggtgtcgagttcacggtccacgtggcgctaggcttc
ctgaccacccagggtagccggaacctgcgggctgcccgggccctagagcacacatttgcc
ccggtgaccgatggggctgtctccacattgctgggtctgctcatgcttgctggttccaac
tttgacttcatcataaggtacttcttcgtagtgctgactgtgctcacgctcctcggcctc
ctccatgggcttgtgctgctgcctgtgctgctgtccatcctgggccccccaccagaggtg
gtacagctgtacaaggagagcccagaggtcctgagccccccagctccacgggtaggaggg
ctcagatgggggatgtcccccactctgccccagagctttgccagagtgactacctccatg
accgtggccctccacccacccccactgcctggcgcctacatccacccagcctctgatgag
cctacttggtcccctgctgccataccagctgccagcagctccagcaacctcagttctagg
ggactatgtcccacaactgggtga
DBGET
integrated database retrieval system
