Geospiza fortis (medium ground-finch): 102038580
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Entry
102038580 CDS
T03755
Symbol
TOPORS
Name
(RefSeq) TOP1 binding arginine/serine rich protein
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gfr04121
]
102038580 (TOPORS)
03036 Chromosome and associated proteins [BR:
gfr03036
]
102038580 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gfr03037
]
102038580 (TOPORS)
Enzymes [BR:
gfr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102038580 (TOPORS)
Ubiquitin system [BR:
gfr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102038580 (TOPORS)
UBL E3 ligases
102038580 (TOPORS)
Chromosome and associated proteins [BR:
gfr03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
102038580 (TOPORS)
Cilium and associated proteins [BR:
gfr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102038580 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
102038580
NCBI-ProteinID:
XP_005425384
UniProt:
A0A6I9HLV3
LinkDB
All DBs
Position
Un
AA seq
984 aa
AA seq
DB search
MTSDKEFAENSNFSPKASTSKLPTDASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEW
SKNKAECPLCKQPFFSIFHTIRAEDDFKEYVLSPLETSSFASPDGRRFRYRTTLTRERRR
RGSPSRRMPSPPDNGMLFEGLSSEPAQHRHREIQQMLRRLASRRKASAEGRSLRQIQEED
MIAFRRALYRTGVRIRSIQDGGRYREISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSL
INIVQHIIMSNVTRYDLESQAFADDLKPFLLNRTEHFLHEFISFARCPFNLEAYDQHANY
DCPAPSYEEGSHSDSSIITISPDVAYSQGPANSLSVPGLGQAPWDDETPGPSYSISEEVR
ATIASPLESSESSDEDSASGSRRSKLQTELQAHADSNDSGSSSDNCVIVGYVKPLAERTP
EVVELSSDSEESIKEEKREEVKKQRPVQCHSWSDSDPSRSLSPHSPAYKEDVGSCRSCLS
PAVEKMESKGDEKNKCKRKDLPPQDFSWSPSPGSDTVCSPWNHGLSKKGKSRSPQSCSRD
SRGSHGHRSRREHRSKSQLKKRRSRSRDSSKHRSKRSSRRSRAHDTRASLKSQRGSLSGE
STPSREVSRSRSRSKGHSKRRSRSRDSDRYYVRDSYQSRHQWGSAFCSRKVFGDSYESSS
RRRTRSNTLYSRQSASPEYRIRSFIERTDLHSQRGLHERHYYCYERCRSRSRSSNRSRTP
SGGNDRMKSEKPGGKRKYKTRHLENAFMESPSLERENESKKTSSKFGDCCKNEDSLSDNR
ASSETKRKKRKKKMRSPSVEIVYEGKATDTTRHLKKKKKKHKKKHRKHHTSNSVHSSPVV
ITIDSDSSKEPESTEWDSSITWTGTTQINERQNETGCEETGEVDSKYGIPDTRENLDGGV
RNDDVKLQERAADQSVTTVSTSSNTSHTETVTSYVQEAPATPSSQLPSPRTSFLECPERE
PLILRLPKRLVNRSSWFDFPEEKM
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagataaggagtttgcagaaaacagcaatttttctccgaaagccagcaccagt
aagctgccgacagatgcatctccggactccaagtgccccatctgcctggacagatttgac
aatgtggcatatctggatcgctgcttgcacaggttctgcttccgctgcgtccaagagtgg
tccaagaacaaagcagaatgcccgctatgcaagcagcccttcttttccatcttccatacg
attcgtgctgaagacgacttcaaggagtacgtcctcagccctttagaaacaagctctttt
gccagccccgatggccggaggtttcgttaccgcaccaccttaacgagggaacgccgcagg
cgcggttccccttcccggaggatgccgtcccctccggacaacgggatgttgtttgaaggg
ctgtcgagcgagccggcgcaacacaggcacagagagattcagcagatgctcaggaggctg
gcctcaaggaggaaggccagcgcggagggcagatctctgcggcagattcaggaggaggac
atgatcgctttccgcagggctctgtaccgcaccggcgtgcgcatccgcagcatccaggac
ggcggccgataccgagagatttcggccgagttcttccgccgcaaccctgcttgccttcac
cgcctggttccttggctgaagcgagagcttacggtcctgtttggtgcccacgggtctctg
atcaatattgtgcagcacatcatcatgagtaacgtaaccaggtacgatctggaaagccag
gcctttgctgacgatctgaagccatttctgctgaatcggacggaacacttcctgcacgaa
ttcatcagttttgctcgttgtccttttaatttagaagcatacgatcaacacgccaattat
gactgtcctgcaccatcatatgaggaaggaagccactcagactcatcaattattacaata
tctccagatgtggcgtactcgcaagggccagctaatagtttgtctgttcctggtcttggt
caggccccgtgggatgacgaaactccgggcccttcgtattccatttcagaagaggttcgt
gcaaccatagcttctcctctggagtcatcagaaagttctgacgaggactctgcttcaggg
agccgaagaagcaagctgcagactgagttacaggctcatgctgactcaaacgacagtggc
tcttcctcagacaattgtgtcattgttgggtacgttaagccgctagctgagcggacccca
gaagtggtcgagctgtcctctgactctgaggagtccatcaaggaagagaaaagggaagag
gtcaagaaacagcgaccagtccagtgtcacagctggagtgacagtgacccaagcaggagc
ctctcaccacattccccagcatataaggaggatgtaggaagttgtagaagctgtttatct
cctgcagttgagaaaatggaatcaaaaggggatgagaagaacaaatgcaaaagaaaagat
ctgcctccacaggacttcagttggagcccctctccagggagtgacacagtatgctcccct
tggaatcacggattgtctaaaaagggaaagtctagaagcccacagtcctgttcacgggac
agtcgaggcagccatggccatcggtctagaagggagcaccgtagcaaaagccaacttaaa
aagagacgatcgagaagcagagatagtagcaaacataggagcaaaagaagcagcagaaga
tcaagggctcatgacaccagagcctctctgaaaagccagaggggctctctaagtggtgag
agcactccatccagagaagtgagcagatcacgttcacgcagcaaaggccacagtaaaagg
agatcaagaagtagagacagtgatcgctattatgtaagagacagttaccaaagtagacac
cagtggggttctgctttctgtagtcgaaaggtgtttggagacagttatgaatcctccagc
agaaggaggacccggtcgaacactctttactcgcggcaatctgctagtccagaatacagg
atacgatcatttattgagaggacagatctgcatagccagagggggctccatgagagacac
tattactgttacgaaagatgcaggtcaaggagtcggtcaagcaacagatcaaggactcct
tctggaggaaatgacagaatgaaaagtgaaaagcctggtggaaaaaggaagtacaaaact
cgccacctggagaatgcattcatggaaagcccaagtctagaaagagaaaatgagtccaaa
aaaacttcatcaaaatttggtgactgctgcaaaaatgaagatagcctgtcagacaatcgt
gcaagcagtgagacaaagcgtaagaaaaggaaaaagaaaatgaggagtccgagtgtggag
atagtctatgaaggaaaagcaacggacacgacaaggcatcttaaaaagaaaaagaaaaag
cataagaagaaacaccggaaacatcacacgagtaactccgtacattcttctccagtggtg
attacaattgatagtgatagtagcaaggagccagaaagtaccgaatgggacagcagtatt
acatggacaggcacaactcaaataaatgagaggcaaaatgagacgggatgtgaggaaact
ggagaagtagacagtaagtatggtatccctgacacaagggaaaacttagatggtggcgtt
agaaatgatgatgtcaaacttcaggaaagagcagctgatcagagtgttaccacagtgagt
accagcagtaacacctctcacacagaaactgtaaccagttatgttcaggaagcaccagca
acgccttccagtcaactgccttcccccaggacttccttcctagagtgtccagagagagag
ccattgatactgagactgccaaagagacttgtcaacagatcctcgtggtttgatttccca
gaagaaaaaatgtag
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