Geospiza fortis (medium ground-finch): 102039902
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Entry
102039902 CDS
T03755
Symbol
SGPL1
Name
(RefSeq) sphingosine-1-phosphate lyase 1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
gfr
Geospiza fortis (medium ground-finch)
Pathway
gfr00600
Sphingolipid metabolism
gfr01100
Metabolic pathways
Module
gfr_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
gfr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
102039902 (SGPL1)
Enzymes [BR:
gfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
102039902 (SGPL1)
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Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
102039902
NCBI-ProteinID:
XP_005430494
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All DBs
Position
Un
AA seq
612 aa
AA seq
DB search
HTFKSSRFLISERSRIVSLCLPTSFAPAGHPVVQTSSCNXELTNEHSLPAAYDAITPYKE
ILQMYWEKVTGFVNARCDGLEPWQLIGLTFSSTLASVWLHGFLCQPESLTSRTKKQFFKL
LRKMPFVGAIIQKKIDEALNDVTSSLSFLKDEREYIKALPEQGMSQPEVLQKMKEYSSKG
DVRWQDGKVSGTVYSGEEKLTHLLVKVYEEFAWSNPLHPDIFPGLRKMEAEVVRIACTLF
HGGPKSCGAMTSGGTESILMACKAYRDLAYERGIKQPEMLVPVSAHAAFDKAAHYFGMKL
IQIPLTKAMEVDVQAMRRAISRNTAMLVCSAPQFPHGIMDPIEEVAELAVKYKIPFHVDA
CLGGFLIAFMDKAGFPLKRPFDFRVEGVTSISADTHKYGYAPKGSSVVLYSDKEYRKYQF
FIAPDWQGGIYASPSVAGSRPGGIIAACWATLLHIGESGYVEATKRIIKTARFLESELRK
IDSIFIFGKPEVSVLSIGSDTFDIYRLSNSLAAKGWNLNVLQFPPSIHLCITQLHTKPGV
AEQFLKDVRDSIQDIMKDLKAKTTGMGAIYGMAQSIPDRSLVAEISQAYLDGLYSTDVLS
TEKHMNGSPSHH
NT seq
1841 nt
NT seq
+upstream
nt +downstream
nt
cccatactttcaaaagttcacgatttttgatttctgagcgatcacgcatcgtgtcgctct
gtctgcccacatcctttgctcctgctgggcatcccgtggtccaaacctcgagctgcaatt
aggagctgactaacgaacattccctgcctgctgcttatgatgccattacaccctacaagg
aaatcctccagatgtactgggagaaagtgacaggctttgtgaacgcccgctgtgatgggc
tggagccctggcagctcattgggttgactttttcttccacacttgcaagtgtgtggctgc
atggcttcctctgccagcccgagagtttgacatcccgaactaaaaaacagttctttaaac
tgctgagaaaaatgccatttgttggggctataattcaaaagaagattgatgaagccttga
atgatgtcacttccagtttatccttcctgaaagatgaaagggaatatatcaaagcactgc
cagaacaaggcatgagccagcctgaagtgctgcagaagatgaaagagtacagctcaaaag
gagatgtacgctggcaggatgggaaagtctcagggactgtgtacagtggtgaagagaaac
tcacccacctgctggtcaaggtgtatgaagagtttgcctggagtaatcctctccatccag
atatattccctggtctgaggaagatggaagcagaagtagtgaggattgcctgcacactct
tccacgggggccccaaatcttgtggtgctatgacatctgggggcactgagagcatcctga
tggcctgcaaggcatacagagacctggcttatgagagaggcatcaagcagccagaaatgt
tggtccctgtgagtgcccacgctgcctttgacaaggcagcacactactttgggatgaagc
tgatccaaatacctctgaccaaggctatggaagtggatgttcaggcaatgaggagagcca
tctcgaggaacacagccatgctggtctgctctgctccccagttcccacatggaattatgg
accccattgaagaggtggcagagcttgcagtgaagtacaaaatccccttccatgtggatg
cctgcctgggtggattccttattgctttcatggacaaggcaggcttccctctcaagcgtc
cctttgacttccgtgtggaaggtgtgaccagcatttctgctgacacccacaagtatggct
acgctcccaagggctcctcggtggtgctctacagtgacaaggagtacaggaagtaccagt
tcttcatagcccctgactggcaagggggaatttatgcctccccctccgtggcaggctcca
ggcctggtgggatcatagctgcatgttgggcaaccctgctgcacatcggagagtcgggct
acgttgaggctacgaagaggatcattaaaacagctcgtttcctggagtcagagttgagaa
aaatcgacagcatcttcatttttgggaagccagaggtgtctgtcctgtccattggctcag
acacttttgacatctatagattatctaattctttagctgcaaaaggatggaacttgaatg
tcctacagttcccaccaagcatccatctctgcatcacacagctgcacaccaagcccggcg
tggctgagcagttcctgaaggatgtcagggacagcatccaggacatcatgaaggacctca
aggccaagaccacgggcatgggagccatctatggaatggcgcagtccatcccagacagga
gcctggtggcagagatttcccaggcctacctggatggcctctacagcacggatgttctca
gcactgaaaagcacatgaacggctctcccagccaccactga
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