Gossypium hirsutum (upland cotton): 107925046
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Entry
107925046 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: abnormal spindle-like microcephaly-associated protein homolog
KO
K16743
abnormal spindle-like microcephaly-associated protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107925046
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
107925046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
CH
HI_0552
Arm
Motif
Other DBs
NCBI-GeneID:
107925046
NCBI-ProteinID:
XP_040935298
LinkDB
All DBs
Position
A10:complement(1127692..1144938)
Genome browser
AA seq
1757 aa
AA seq
DB search
MEEEERFPPLSSSFVLKDISNLKTPKRITKNPQFFTACNETPRSSSSFRYRSRPSLVPSS
SRSKAKAKLKAFQLERSQSACKEQLKKDRSLKSLAKSLTAWLNFLFQNPEFCGCDLSING
CNESNVVRVDSAWRSPKRMRALWWRGEESENVVADVSSLKYSSLRSSLKDVCSFDELKQR
MQVYLSLVSCKEVFNVMTQVAKNIDGGRLTMKANCPIVTDVGIKEKATKILMSYNPIWLR
IGLYIIFGGDSLISPEGDLSSVKDISFLKMIIEKQFFSHTGLAKAYAYNKKLEGLYRPGF
YENLGNIILKRTFLLVLILDRAKSQTSLPLNYGIDGVDGGSPLLFTVSSGIKSSRQVLNN
FLSSDVMHGEGDLLAHLVTVGYKVSHQQSALVEFDFQVSDLFLDLXDGVRLCRVIQLLRH
DSVGLNSLLHEQKIVVPSDTHKKNLANCGVALQYLREAGVMLCDEDGLKITRDDVADXDT
ELTLSLLWNIFVRLQLPLLIDRTTIASEISKIRGFNMDKLNVINSTNLGMLLNWIQAICE
NYGLKVDSFSSLVNRKAIWCLLDYYFRRELSCSNKDSHETRDEKSIMSTTDYTDAVHNFV
LSQKLTAILGKFPEVLQISDLLEHNGAVSEKSVVVLLTFILSQLIVKKNVDQLNFHKMLG
CNCQTLERRRHSLTRRRSASTEAIVRTDRDLDITEDATKKFKIIQAWWRDMTERNYKSVV
RPAASTSSCFPARKTSIDILREKAAIVIQSHFRRFIERHNFLKMTKAIGLIQTVTRAWLT
VKKNSALNKFRFAGVPEVPSGHVARIWVAQRRDASCPILIKAAIVIQKCFRGWVVRSLHM
IENASRKCQQKGLSNSEIEAATGIQIAWKNFVSRSLHKHTFAATKIQSHFRGWQLKRNFM
KQKQAIITIQSNFRQFKCSSTFQQYKTARIENASFKYEEKSLSIGETEAASKIQIAWKNF
VCRYLQKQTYAATKIQSHYRAWQLRRSFIKQKQEIIKIQSNFRRLKCWWAFQIAQKEFVC
RSLQNQTFAATKIQSHFRGWQLRRSFVKQKQAIIAIQSKLRQLKCSNAFQQYKMAARSAI
IIQSCVRRWIAQRRALRCRYLTVAIQRHCRGWLARKDLLKQRNAVIKIQRAIRCVICQKA
FHLQKLAAIEIQRAIRGQISRKKLLGASSFCAASASSYGCNMSKGFFQSFELKLVITSVL
KLQRWWRSVLLLKLRTKSAIIIQSHSRGWIAKQKAYIERHCIVLLQRHCRGWLVRKDFSL
KRDSVIKIQRAIRCLICQKAFHLHKLAAIDIQRVIRGQLSRSRLLGASSFHVATAGSYNC
KMSKGFFQSFELKLVITSVLKLQRWWRGVMLLKLRTKSAIIIQSHARGWIAKRETCRQKH
CIVVIQRQSRGWLVRKDVLLRRDAVIKIQRAIRSLICQKAFHLQKLAAIDIQSVIRGQIA
RSRLLGATSVQAAGGGACNCNMAGGFFRSFELTLVIISVLKLQRWWIGVLLLKSRARSVI
IIQTHARGWIARQKVYRKRTCIVVIQSYWKGYVARKESREQLLNLRLRMQKSAMNVDDSR
RLINRLLSALSELLSMKSIRGILHNCETLDMATAHSLKCCEELVAAGAITILLKLIRAAS
RSIPDQQVLKHALSTLRNLARYPHLTQVLIDTPASVETILWELHRNKEEGYFIASQILKK
ICSNENGVITVHKFPALLKRLYNLVEELTRKAYNEKRNPRAVAVRDNTDRRLKEAVELLK
LITNGYKSSKLPIAFAM
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagagcgtttccctccattatcttcttctttcgttcttaaagacatctcc
aatctcaaaaccccaaaacgcattaccaagaatcctcaattcttcaccgcttgtaatgaa
actccgaggtcatcctcgtcatttcgttaccgttctcggccttcccttgtcccttcctct
tcccgctccaaagccaaagccaagctcaaagccttccagttggagcgatctcagtccgct
tgcaaagagcaactcaagaaggaccgatcgctaaagtctttggctaaatctctcaccgct
tggctcaatttcctctttcagaatccggagttttgcggctgtgatttgtcaattaatgga
tgcaatgagagtaatgttgtgcgagtggacagtgcctggagaagtccaaaaaggatgaga
gcgttgtggtggagaggggaggaatctgaaaatgttgttgcggatgtttcaagtttgaag
tactcgagtttgaggtcttcgttgaaggacgtatgtagtttcgatgaattgaagcagcgg
atgcaggtttatttgagtttggtgagctgcaaagaggttttcaatgtcatgactcaagta
gctaagaatatagatggagggaggttaacgatgaaagcaaattgtcctatagttacagat
gttggaattaaggaaaaggctactaaaattctaatgtcctacaacccaatttggcttcga
attgggttgtatattatttttggtggtgattccctgatatcacccgagggagatcttagt
tctgtgaaagatatttcatttttgaagatgataatagaaaaacaattcttctcgcacact
ggacttgcaaaggcttatgcctataacaagaagttggaaggtttgtacaggccgggattc
tacgagaatctggggaatattatattgaagagaacttttttgcttgttcttatccttgac
cgagctaaatctcagaccagtcttcctcttaactacggtattgatggagtcgatggaggt
tctcctcttctgttcacagtttcgtctggtataaaatcaagtcgtcaagtccttaataat
ttcttatcatctgatgttatgcatggagaaggtgaccttcttgcacatctagtgactgta
gggtataaagtttctcatcagcagtctgcccttgtggagtttgatttccaagtatcagat
ttattcttggatctttaagatggtgtgcggctctgtagagttattcagcttttgcgacat
gattctgttggacttaatagcttgttgcatgagcagaaaatagtagttccttcagacacc
cataaaaagaatttggccaattgtggtgttgccctgcaatatttgagagaggctggtgtc
atgctatgtgatgaagatggattgaagattacaagagatgatgttgctgacnnagatacg
gaactcactctatccttgctctggaatatatttgttcgtttacagttgccacttctgatt
gacagaacaaccattgctagtgaaatatccaaaatacgtggctttaatatggataagttg
aatgtaataaattccacgaatttgggaatgcttttaaactggatccaggcaatttgtgaa
aattatggtcttaaggttgacagtttttcttcactggttaatagaaaagccatatggtgc
ttgcttgattattacttccgcagagagctttcttgttctaacaaggactctcatgaaaca
agagatgagaaatcaatcatgtccactactgattacacagatgcagttcacaattttgta
ttatcacagaaactaacagcaatattgggaaagtttcctgaggttctgcaaataagtgac
ttacttgagcataatggtgcagttagtgagaagagtgtggtagttttgctgactttcatt
ctgtcccagcttatcgtcaagaaaaatgtggatcagttgaatttccataaaatgttgggt
tgtaattgccaaaccctagagaggaggagacattcattaactcgaaggcggtcagcaagt
actgaagcaattgtgcgaacggacagagacttagatatcactgaagatgctactaaaaag
tttaagatcattcaggcttggtggcgagatatgacagaacgaaactacaaaagtgttgta
agacctgctgcttctacttcatcttgctttccagctcggaagacaagcattgacatttta
agagaaaaggccgcaatagtcatacagtctcatttcaggcgattcatagagcgtcataat
tttcttaagatgacaaaagctattggcttaatccaaactgttacgcgtgcatggttgact
gtgaagaaaaattcagcgctcaataaattcagatttgccggagttccggaagttccatct
ggtcatgttgcaagaatttgggtagctcaaagacgtgatgcatcctgtccaatcctcatc
aaagctgccattgtaattcagaaatgttttcgtggttgggtggtaagatcacttcacatg
attgagaatgcttctcgtaaatgccagcagaagggtctaagtaatagtgaaatagaagca
gcaaccgggattcagattgcatggaagaattttgttagcagatctctgcacaaacacact
tttgctgcaacaaaaattcagagtcatttccgtggctggcagttaaaaaggaattttatg
aagcagaagcaagcaataatcacaattcaaagtaattttcgacagttcaaatgttcgagt
acttttcaacaatataaaactgctcgtattgagaatgcttcgttcaagtacgaagagaag
agtctaagtattggtgaaacagaagcagcaagcaagattcagattgcatggaagaacttt
gtttgcagatatctacaaaaacagacttatgctgcaactaaaattcagagccattaccga
gcttggcaattaaggagaagttttataaagcagaagcaagaaataataaaaattcaaagt
aattttcgacggctgaagtgttggtgggcctttcagattgctcagaaggaatttgtctgt
agatctcttcaaaatcagacatttgctgcaacaaaaattcaaagtcatttccgtggttgg
cagttaaggaggagttttgtcaagcagaagcaagcaataatagcaattcaaagcaaatta
cgacagctaaaatgttcaaatgcttttcagcaatataagatggctgccagatcagcaatc
atcattcaatcttgtgttcgtagatggatagctcagagaagagctttgagatgtaggtat
cttactgttgcaatccaaagacattgccgcggttggcttgcaaggaaggatcttttgaag
caaaggaatgctgtaataaagatccaaagagcaatacggtgtgtaatatgtcagaaggcg
tttcatcttcagaaattggcagctattgagattcaaagggctatcagagggcaaatttct
cgaaaaaagcttttaggagcatcttccttttgtgcggctagtgcttccagttacggttgt
aatatgtcaaagggcttcttccagagttttgaactaaaattagtgattacttcagttttg
aaactgcaaaggtggtggagaagtgttctgttacttaaattaagaacgaaatcagcaatc
attattcagagtcattcacggggatggattgctaagcaaaaagcatatatagagaggcat
tgtattgttttactacaaagacattgccgtggttggctcgtaaggaaggatttttcgttg
aaaagggattctgtaataaagatccaaagagcgatacggtgcctaatatgtcagaaggca
ttccatttacataaactggcagctattgatattcaaagggttatcaggggtcaactgtct
cgaagtaggcttttaggagcatcttcctttcatgtagctactgctggcagttacaattgt
aagatgtcaaaaggcttcttccagagttttgaactaaaattagtgattacttcagttctg
aaactgcaaaggtggtggagaggtgttatgttacttaaattaagaacaaaatcagcaata
attattcagagtcatgcacggggatggattgctaagcgagaaacttgcagacagaagcat
tgtattgttgtaatacaaagacagagccgtggttggcttgtaaggaaggatgttttgttg
agaagggatgctgtaataaagatccaaagagcaataaggagcctaatatgtcagaaggcc
tttcatttacagaaactggcagctatagatattcagagtgttatcaggggccaaattgct
cgaagtaggcttttaggggcaacttctgttcaggcagctggtggtggtgcctgcaattgt
aacatggcaggaggcttcttccggagttttgaattaacattagtgattatttcagttctg
aaactgcaaaggtggtggataggtgttctgttacttaaatcaagagcaaggtcagttatc
attatccagactcacgcacggggctggattgctaggcaaaaagtgtatagaaagaggact
tgtattgttgtaatacaatcatattggaaaggttatgttgctcggaaagaatcaagagag
cagctattgaatttgcgcttgagaatgcaaaagtctgctatgaatgttgatgatagcaga
cgtcttattaaccgccttttgtcagcactttcggaactactgagcatgaaaagcatccgt
ggcattcttcacaactgtgagaccttagatatggctacagctcattctctgaaatgctgc
gaagaacttgtggctgccggtgcaatcaccattctcctaaagctgattcgtgccgccagt
cgtagcatacccgatcaacaggttctaaagcatgcactctcaacacttcgaaaccttgca
cgttatccgcatttgacacaagtgttaatcgacactcctgcatctgtagagacaatctta
tgggagttgcacaggaacaaggaagaaggatattttattgcttcacaaatcctgaagaag
atatgttcaaatgagaatggtgtgataactgtacacaagtttcccgctcttttgaagaga
ctatacaatcttgttgaagaactcacaaggaaagcatacaatgaaaaaaggaatccccgt
gctgttgctgtaagagacaacacagatagaagattgaaggaggccgtggaacttcttaaa
ctaataacaaatggttacaaatccagcaaattgccaatcgcttttgcgatgtga
DBGET
integrated database retrieval system
