Granulicella mallensis: AciX8_4596
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Entry
AciX8_4596 CDS
T01664
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
gma
Granulicella mallensis
Brite
KEGG Orthology (KO) [BR:
gma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gma03016
]
AciX8_4596
Enzymes [BR:
gma01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AciX8_4596
Transfer RNA biogenesis [BR:
gma03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AciX8_4596
Prokaryotic type
tRNA splicing ligases
AciX8_4596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AEU38866
UniProt:
G8NVW3
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All DBs
Position
5846285..5847499
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AA seq
404 aa
AA seq
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MQIIDNIPVFGEHEANTLEQARLCARTADRFALMADGHLGYGVPIGGVIATESRISPTAV
GFDIACGNKAVRLDMPGTELRANIHRVMEEIWSTLSFGVGRKNAERVEHPLFERDAHPGW
ATEAAAPIKRKAEAQLGTIGSGNHYVDLFTDEQDRVWVGVHFGSRGLGHGIATWFLKAAG
AKDGMMVDPVFLDVTSDLGAQYIAAMQLGGAYAYAGRDWVCSRVAKLLGATIEEEVHNHH
NFAWLEEHDGRQLWVCRKGATPAFPGQRGFVGGTMGEQSVILEGTAPDLSTAEGKATAAA
QAASLCSTVHGAGRVMGRKQAAGVFDRKTGVCKREGLVKPEMMNDWMQRSNVVLKGGGLD
ESPHCYKRLPEVLAAHGSTIRVLHTLTPVGVAMAGANEFDPYKD
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcatcgacaacatccccgtcttcggagagcacgaagcgaacaccctcgaacag
gcgcgtctctgcgcccgcaccgccgaccgcttcgccctgatggccgacggccatctcggc
tatggcgtgccgatcggcggagtcatagcgaccgagtcgcgcatctcgcctaccgctgtc
ggcttcgatatcgcctgcggcaacaaggccgtacgcctcgacatgcccggcacggagctt
cgcgcgaacatccaccgcgtcatggaagagatctggagcacgctgagcttcggcgtcgga
cggaagaacgccgagcgcgtcgagcacccgctcttcgagcgcgatgcgcaccccggctgg
gccacggaagccgccgcaccgatcaagcgcaaggcggaggcccagctcggcaccatcggg
tccggcaaccactacgtcgatctcttcaccgacgagcaggaccgcgtctgggtcggggtg
cacttcggctcgcgcggcctgggccacggcattgcgacgtggttcctgaaggcggcgggg
gcgaaggacgggatgatggtcgatccggtcttcctcgacgtcacgagcgatctcggcgcg
cagtacatcgccgcgatgcagcttggcggagcgtacgcctatgccgggcgcgactgggtg
tgctcgcgtgtggcgaagctgctgggcgcgaccatcgaggaggaggtgcacaaccaccac
aacttcgcgtggctggaggagcacgacggcaggcagctctgggtctgccgtaagggcgcg
acgccggccttcccgggccagcggggcttcgtcggcggaacgatgggcgagcagtcggtg
atcctcgagggcacggcgcccgacctcagcacggcggagggcaaggcgacggctgccgca
caggctgcttcgctgtgctcgaccgtccacggcgcaggccgtgtgatgggacgcaagcag
gctgccggggtcttcgaccgcaagaccggcgtctgcaagcgcgaggggctggtgaagccg
gagatgatgaacgactggatgcagaggtcgaacgtcgttctcaagggcggcgggctggac
gagtcgccgcactgctacaagcgcctgccggaggtgcttgcagcgcatggctcgacgatt
cgtgtgctgcacacgcttacgccggttggcgtggcgatggcgggggcgaatgagttcgat
ccttataaggattga
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