Geomonas subterranea: KP001_15585
Help
Entry
KP001_15585 CDS
T07936
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
gsub
Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsub03032
]
KP001_15585
03036 Chromosome and associated proteins [BR:
gsub03036
]
KP001_15585
03400 DNA repair and recombination proteins [BR:
gsub03400
]
KP001_15585
DNA replication proteins [BR:
gsub03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KP001_15585
Chromosome and associated proteins [BR:
gsub03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KP001_15585
DNA repair and recombination proteins [BR:
gsub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KP001_15585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
GTP_EFTU_D2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
QXE89836
LinkDB
All DBs
Position
complement(3586431..3586715)
Genome browser
AA seq
94 aa
AA seq
DB search
MTKAELVEAVAKSANIPKAAAEKAVGAFISTVSGALKKGDRVTLVGFGSFEVSSRQARTG
RNPQTGKEIKIAEAKVPKFRPGKALKDAIAAKKK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagaactggtcgaagcagtggcgaagtccgcaaacatccccaaggccgca
gccgagaaggccgtcggtgcattcatctccaccgtgagcggtgcgctgaagaagggcgac
agggtaaccctggtaggtttcggcagcttcgaggtttccagccgccaggcccgtaccggc
aggaacccgcagaccggcaaggagatcaagatcgccgaagccaaggtgcccaagttccgc
ccgggcaaggccctgaaggacgccatcgctgccaagaagaagtag
DBGET
integrated database retrieval system