Candidatus Hamiltonella defensa (Acyrthosiphon pisum): HDEF_0654
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Entry
HDEF_0654 CDS
T00911
Symbol
rppH
Name
(GenBank) dinucleoside polyphosphate hydrolase, NUDIX domain protein
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
hde
Candidatus Hamiltonella defensa (Acyrthosiphon pisum)
Pathway
hde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HDEF_0654 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hde03019
]
HDEF_0654 (rppH)
Messenger RNA biogenesis [BR:
hde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HDEF_0654 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ACQ67395
UniProt:
C4K4A2
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All DBs
Position
653354..653845
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AA seq
163 aa
AA seq
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MIDNDGYRLNVGIVICNKKGQVLWAKRYGQYSWQFPQGGIHLTESPEEAMYRELFEELGL
NKKDVRILTSTHYWLRYKLPKHLVRWNTDPVCIGQKQRWFLLELTCDDSNINVECTKAPE
FDGWCWVSFWYPVRQVVSFKRDVYRQVMKEFFSFVSLIQKHLI
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
gtgattgataatgatggctaccgcttaaatgtcggtatcgtaatttgtaacaaaaaaggg
caagttttatgggctaagcgttatgggcagtattcctggcaatttcctcaaggaggaatt
catttgactgaatcgcctgaggaggcaatgtatcgtgagttatttgaagaactggggcta
aataaaaaagatgttcgaatattgacttccactcattactggttgcgttacaaattaccc
aaacatttagtacgatggaatacagacccagtctgtattggccaaaaacaacgatggttt
ttattagagttaacctgtgacgatagcaatatcaatgtagaatgcacaaaagccccagaa
tttgatggctggtgctgggtaagcttttggtatccagtacgccaggtggtgtcttttaag
cgggatgtttatcgtcaggtgatgaaagagtttttttctttcgtttctttgattcaaaag
catttgatatga
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