Heterocephalus glaber (naked mole-rat): 101717472
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Entry
101717472 CDS
T02812
Symbol
Topors
Name
(RefSeq) TOP1 binding arginine/serine rich protein
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
hgl
Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:
hgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hgl04121
]
101717472 (Topors)
03036 Chromosome and associated proteins [BR:
hgl03036
]
101717472 (Topors)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hgl03037
]
101717472 (Topors)
Enzymes [BR:
hgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101717472 (Topors)
Ubiquitin system [BR:
hgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101717472 (Topors)
UBL E3 ligases
101717472 (Topors)
Chromosome and associated proteins [BR:
hgl03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
101717472 (Topors)
Cilium and associated proteins [BR:
hgl03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101717472 (Topors)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
101717472
NCBI-ProteinID:
XP_004838441
LinkDB
All DBs
Position
Un
AA seq
1077 aa
AA seq
DB search
MRWQSGDCVLTRGACGGVLFLPCPHAASGKERFPLQGSQPPPGSPLSREEGNAPPPAPAA
EGRRRSRRVRLRGSCRHRPSFLGRRELSSSAPAGPAPASSEIMASAAKEFKMDNFSPKAG
TSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCLHKFCFRCVQEWSKNKAECPLCKQPF
DSIFHSVRAEDDFKEYVLRPSYNGSFATPDGRRFRYRTTMTRERSASVYSPSSTLSRRTT
TPPDSGVLFEGLDISTRHRDVEIPQLMRQIAIRRQHTSDERSLRKIQEQDIINFRRTLYR
AGARVRNIEDGGRYRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHASLVNIVQHIIMS
NVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFARSPFNMAAFDQHANYDCPAPSYEEG
SHSDSSVITISPDETETQEQDINEATVSQAPWDDETPGPSYSSSEQVHVAMSSLLNTSDS
SDEELVTGGAPSQIQGVQTNEDLNNDSDSSDNCVIVGFVKPLAERTPELVELSSDSEELG
SYEKMETVKTQEQEQSYSSGDSDVSRCSSPHSVLGKDEQMNKGHCDSGTRIKSKREEKRS
TSLSSPRDLSSSMRGDRVCSPYNHRHRKRGRSRSSDSHSQSRSGHDQRNYRKHHGKKRMK
SRRSRSRESSRSKGRRDKKRSRTRDSSWSRRSQTLSLSSESSSRSRSRSSDHSKRSQSRN
RDRYYLRNNYGSRYKWEYTYYSRNKDRDGYESSYRRKTLSRAHYSRQSSSPEFRVQSFSE
RTNARKKNNHSERKYYYYEKHRSRSLSSNRSRTASTGTDRVRNEKPGGKRKYKTRHLEGS
NEVVQPSREFASKVKDSHYQKSSSKFDGSYKNESDSFSDSRSSDRDTKRKRRKRRTRSLS
VEIVYEGKATDTSKHHKKKKKKHKKKHKKHHGDNTRSPVVITIDSDSDKDSEVKADMECD
NNGTQDSLQNEFLAPSLEPLEAKDIVTIEDEFSVLDKECDITTLTNNLNNANKTVGDIPP
QTASAEQTLDVREECTFASVLENQSSNVSIQIEPSNHLPSPRTSLLSVSLGRDCDMS
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggcagagcggggattgtgttttgactcgcggagcgtgtggcggtgtgctgttt
ctgccctgcccccacgctgcctccggtaaagaacgttttccgttacaggggtcgcagccg
ccgccgggatctccgctgtctcgcgaggagggcaacgcgcccccgcccgctccggctgcc
gagggtaggcggagaagtcgccgggtccgccttcgcggatcctgccgtcaccgaccgagc
ttcctgggccgccgagagctttcttctagcgccccagccgggcctgcgccggcgtcttcc
gagataatggcatcagccgctaaggaatttaaaatggacaacttttcacctaaagctggc
actagcaaattgcaacagacagtaccagctgatgcatctcctgattctaagtgtcctata
tgcttggatagatttgataatgtgtcttacttagatcgctgcttacataagttctgtttt
cgctgtgtacaggagtggtcaaaaaacaaagctgaatgtccactatgtaaacagcccttt
gactctattttccattctgtgagggcagaagatgacttcaaggaatatgtcctaaggcct
tcatataatggttcttttgccacccctgatggtcgacgatttcgctaccgcacaactatg
acaagggaacgaagtgcttctgtgtattcacctagtagtactttgagtagaagaacaact
actcctccagatagtggggtactatttgaggggttagatatttcaacaagacatagagat
gttgaaattcctcaacttatgagacagattgcaataaggcgacagcatacttcagatgag
agatctttgaggaaaattcaagagcaagatattattaattttagacgaactctctatcgt
gctggtgctcgagttagaaatattgaagatggtggccgctacagggatatttcagctgaa
tttttccgtagaaatccagcttgccttcacagattagtcccttggttaaaacgtgaactg
acagttctctttggagctcatgcatcattagtcaatattgtccagcatatcatcatgagt
aatgtcactcgctatgacttggagagtcaagcatttgtgtctgatttaagaccattttta
cttaatcgaactgagcattttatacatgaatttatcagttttgctcgatctccttttaat
atggcagcttttgaccagcatgctaattacgattgtcctgctccttcatatgaagaaggc
agccattctgattcttcagtaataacaatatctccagatgagactgagacccaggagcag
gatattaatgaagccactgttagtcaggcaccatgggatgatgaaactccaggaccatct
tactcaagctcagagcaggtacatgttgccatgtcttcccttttaaatacttctgacagt
tcagatgaagaacttgtcacaggaggtgccccatctcaaatacaaggagtacaaaccaat
gaggacctaaataatgacagtgattcttcagataattgtgtcattgttgggtttgttaaa
cctctagctgagaggaccccagaacttgttgaattatcctctgattctgaagagttaggc
tcttatgagaaaatggagacggtaaagactcaagaacaagagcaatcttatagttctggt
gatagtgatgttagtagatgttcatctccacactctgtccttggaaaggatgaacaaatg
aataaaggtcattgtgattctggtacaagaatcaaatcaaagagagaagagaaacgatct
acatcattgtcatctcccagagacctgagctcatctatgagaggagacagagtatgttcc
ccatataaccatagacacagaaagagaggaagatctagaagttcagattcacattcccag
agtagaagtgggcatgatcagaggaattaccgaaagcatcatggaaagaaaagaatgaag
agcagacggtccagaagcagggagagcagcagatctaaagggagaagagacaaaaagaga
tcaagaactagagacagcagttggtcacgaagaagccaaacactttctttaagtagtgaa
agctcaagcagatcaaggtctcggagcagtgatcacagcaaaagatcacagagcagaaat
agagatcgttattacttaaggaataattatggaagcagatataaatgggagtatacctat
tatagtagaaacaaagatagggatggctatgaatcttcttatagaaggaagactctatcc
agagcccattattctagacaatcttcaagtcctgaatttagagttcagtccttttctgag
agaacaaatgctaggaaaaagaataatcacagtgaaaggaaatactattactatgaaaag
cacagatcgaggagcctgtctagtaataggtcaaggacagcatctacaggaactgatcgg
gtgagaaacgaaaagcctggggggaagcgaaaatacaaaacacggcatttggaaggttct
aatgaagtggttcaaccatctcgtgaatttgcttctaaagtaaaagacagtcattaccaa
aaatcttcatcaaaatttgatggaagctacaaaaatgagagtgatagcttttcagacagc
cgatcatcagacagagacacaaaacgcaagagaagaaaaaggaggactcggagcctaagt
gtggaaatagtttatgaaggaaaagctactgatacaagtaaacatcataaaaagaaaaag
aaaaaacacaagaagaagcataagaagcaccatggagataatacacgttccccggttgtt
attaccattgatagtgatagtgataaggattctgaggtaaaggcagacatggaatgtgac
aataatggtactcaagactctctacaaaatgaatttctggctccttccttagaaccactt
gaagctaaagatatagttacaattgaagatgaatttagtgtcctagacaaggagtgtgat
attaccacacttactaacaacttgaataatgccaacaaaactgtaggtgatattccaccc
cagacagcttcagctgaacaaactcttgatgtaagagaagagtgcacctttgcctctgtt
ttggagaaccaatccagtaatgtatctattcaaattgagccatcaaaccacttgccatct
ccacggacctcattattgtcggtgtctcttggtagagactgtgatatgtcttaa
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integrated database retrieval system