Hirundo rustica (Barn swallow): 120755615
Help
Entry
120755615 CDS
T09369
Symbol
SGPL1
Name
(RefSeq) sphingosine-1-phosphate lyase 1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00600
Sphingolipid metabolism
hrt01100
Metabolic pathways
Module
hrt_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120755615 (SGPL1)
Enzymes [BR:
hrt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
120755615 (SGPL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
120755615
NCBI-ProteinID:
XP_039926755
LinkDB
All DBs
Position
8:complement(2646422..2676696)
Genome browser
AA seq
561 aa
AA seq
DB search
MEALIPYKEILQMYWEKVTGFVNARCDGLEPWQLIGLTFSSTLASVWLHGFLCQPESLTS
RTKKQFFKLLRKMPFVGAIIQKKIDEALNDVTSSLSFLKDEKDYIKALPEQGMSQPEVLQ
KMKEYSSKGDVRWQDGKVSGTVYSGEEKLTHLLVKVYEEFAWSNPLHPDIFPGLRKMEAE
VVRIACTLFHGGPNSCGAMTSGGTESILMACKAYRDLAYERGIKQPEMLVPVSAHAAFDK
AAHYFGMKLIQIPLTKAMEVDVQAMRRAISRNTAMLVCSAPQFPHGIMDPIEEVAELAVK
YKIPFHVDACLGGFLIAFMNKAGFPLKRPFDFRVEGVTSISADTHKYGYAPKGSSVVLYS
DKNYRKYQFFIAPDWQGGIYASPSVAGSRPGGIIAACWATLLHIGESGYVEATKRIIKTA
RFLESELRKIDSIFIFGKPEVSVLSIGSDIFDIYRLSNFLAAKGWNLNVLQFPASIHLCI
TQLHTKPGVAEQFLKDVRDSIQDIMKDLNAKTTGMGAIYGMAQSVPDRSLVAEISQAYLD
GLYSTDVLSSEKHMNGSPGHH
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccttattccctacaaggaaatcctccagatgtattgggagaaagtgacaggc
tttgtaaatgcccggtgtgatggacttgaaccctggcagctcattgggttgaccttttct
tccacacttgcaagtgtgtggctgcatggcttcctctgccagccggagagtttgacatcc
cgaactaaaaaacagttctttaaactgctgagaaaaatgccatttgttggggctatcatt
caaaagaagattgatgaagccttgaatgatgtcacttccagtttatccttcctgaaagat
gaaaaggattatatcaaagcactgccagaacaaggcatgagccagcctgaagtgctgcag
aagatgaaagagtacagctcaaaaggagacgtgcgctggcaggatgggaaagtctctggg
actgtgtacagtggtgaagagaaactcacccacctgctggtgaaggtgtatgaagagttt
gcctggagtaatcctctccatccggatatattccctggtctgaggaagatggaagcagaa
gtagtgaggattgcctgtacgctcttccatgggggccccaactcttgtggtgctatgaca
tctggggggactgagagcatcctgatggcctgcaaggcgtacagagacctggcttatgag
agaggcatcaaacagccagaaatgttggtcccagttagcgcccacgccgcctttgacaag
gcagcacattactttgggatgaagctgatccaaataccactgaccaaggctatggaggtg
gatgttcaggcaatgaggagagctatctcaaggaacacagccatgctggtctgttctgct
ccccagtttccacatggaattatggaccccattgaagaggtggcagagcttgcagtgaag
tacaaaatccccttccatgtggatgcctgcctgggtggattccttattgctttcatgaac
aaggcagggttccccctaaagcgtccctttgacttccgtgtggaaggtgtgaccagcatt
tctgctgatacccacaagtatggctacgctcccaagggctcctcggtggtgctctacagt
gacaagaactacaggaagtaccagttcttcatagcccctgactggcaaggggggatttat
gcctccccctccgtggcaggctccaggcctggtgggatcatagctgcatgttgggcaacc
ctgctgcacattggagagtcgggctatgttgaggctacaaagaggattattaaaacagcc
cgcttcctcgaatctgagttgagaaaaattgacagcatcttcatttttgggaagccagag
gtgtctgtcctctccattggctcggacatttttgacatctatcgattatctaatttttta
gctgcaaaaggatggaacttgaatgtcctacagttcccagcaagcatccatctctgcatc
acacagttgcacacgaagcctggtgttgctgagcagttcctgaaggacgtcagggacagc
atccaggacatcatgaaggatctcaacgccaagaccactggcatgggagccatctatgga
atggcgcagtccgtcccagacaggagcctggtagcagagatttcccaggcgtacctggat
ggcctctacagcacagatgttctcagcagtgaaaagcacatgaacggctctcccggccac
cactga
DBGET
integrated database retrieval system