Billgrantia tianxiuensis: EKK97_08630
Help
Entry
EKK97_08630 CDS
T08051
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
htx
Billgrantia tianxiuensis
Pathway
htx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
htx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKK97_08630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
htx03019
]
EKK97_08630
03009 Ribosome biogenesis [BR:
htx03009
]
EKK97_08630
Enzymes [BR:
htx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
EKK97_08630
Messenger RNA biogenesis [BR:
htx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EKK97_08630
Ribosome biogenesis [BR:
htx03009
]
Prokaryotic type
rRNA processing factors
EKK97_08630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
QHC52081
UniProt:
A0A6I6SRQ5
LinkDB
All DBs
Position
complement(1855832..1858867)
Genome browser
AA seq
1011 aa
AA seq
DB search
MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYRGKITRVEPSLEAAFVDFGAD
RHGFLPLKEISREYFLKESSGRPSIKEVLKEGQEVIVQVDKEERGNKGAALTTFISLAGR
FLVLMPNNPRAGGISRRIEGDERTQLKEAMGQLTVPEKMGVIVRTAGIGRSPEELQWDLD
YLVQVWESITEEAGKRPAPFLIYRESNVIIRAMRDYLRQDIGEVLIDNPEVHQEALTFIR
QVMPSYQQKIKLYADEVPLFSRFQIESQIETAYEREVKLPSGGSIVIDHTEALVSIDINS
ARATRGSDIEETALQTNLEAADEIARQLRLRDIGGLVVIDFIDMSPARNQREVENRMRDA
LKLDRARVQIGRISRFGLMEMSRQRLRPSLGETSGVVCPRCNGQGTIRDVRSLSLSIMRL
IEEEAMKERSAQIRAILPVPVATYLLNEKRAVLADIEQRQGVKVLVLPKPDMDTPHYDVQ
RLRDDHIEEEGDQDKSSFELSVETDIGKEPDMSIAKPMARTEAAVKTVIHNEPAPASLQQ
EPPRQAPSPAPATTAAPTAGVLGRLLKGVTKLLGGTESDTTTAAEPRKPTPPQAPPRSED
ERGERNGRGRRRARGESQDDGRSQRGQARPQESARAEARQDSRQEARQDSSGGRGGRGRN
QARADKPQATEEARQAKPRGRDETPRRQKAEPQEKPVEQVTEPAKSDDGKPKRTRNNPRN
RSRQHAINPQAEAEQKRLQAEAPEQKGEAGSEQAKAVTPKPAEQPTEATKAEQPKSEETK
PEAKPEQAKVEAPKPAEKPAEAPKTEQPKSEETKPEAKPEQAKVEAPKPTEKPAEAAKAE
QPKPEETKPATKPEQAKVEAPKPTEKPAEATKAEQPKPEETKPATKPEQAKVEAPKPAEK
PTEATKAEQPNSEEAKPEAKPEQAKAEAPKPDEKSAEAPKAEQPKSEETKPEAKPEQARA
EETKPAEQPAEADKAEQAEAEQTAARRRRRAHNDPREIRRREQEAQKGSQG
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcaatgcgacccagccggaagagctgcgcgtcgcgctggtcgatggacaacgc
ctgtacgacctggacatcgaatccggtgccagggagcaaaagaaagccaacatctaccgt
ggcaagatcacccgagtcgaaccttccctcgaagccgccttcgtcgacttcggcgccgat
cgtcatggttttctccctctcaaggaaatttcccgcgagtacttcctgaaggaatcttcg
ggccgtcccagcatcaaggaggtgctcaaggagggccaggaagtcatcgtccaggtcgac
aaggaggagcgcggcaacaagggtgcggcgctgaccaccttcatcagtctggctggccgc
ttcctcgtactgatgcccaacaatccccgtgccggcggtatctcgcggcgcatcgagggt
gacgagcgcacccagctcaaggaggccatgggccagctcaccgtgccggagaagatgggc
gtgatcgtgcgcaccgccggcatcggtcgcagcccggaggagctgcagtgggacctcgac
tacctggtccaggtgtgggaatcgatcaccgaggaggccggcaagcgccccgccccgttc
ctgatctatcgcgaatcgaacgtcatcatccgcgccatgcgcgattacctgcgccaggac
atcggcgaggtgctgatcgacaaccccgaggtacatcaggaagcgctgaccttcattcgt
caggtgatgccctcgtaccagcagaagatcaaactctacgccgacgaagttccgctgttc
tcgcgcttccagatcgaatcgcagatcgagaccgcctacgaacgcgaagtgaagctgccc
tccggcggctccatcgtcatcgaccataccgaggccctggtatccatcgacatcaactcg
gcgcgcgccacccgtggtagcgacatcgaggagaccgcgctgcaaaccaacctcgaggcg
gccgacgagatcgcccgtcagctacgcctgcgcgacatcggcggtctggtggtgatcgat
ttcatcgacatgagccccgcgcgcaaccagcgtgaggtcgagaaccgcatgcgcgatgcg
ctcaagctcgatcgcgcccgggtgcagatcggccgtatctcccgcttcggcctgatggag
atgtcgcgtcaacgcctgcgcccgtcactgggcgaaaccagcggcgtggtatgcccgcgc
tgcaacggccagggcaccatccgcgacgtgcgctcgctgtcgctctcgatcatgcgcctg
atcgaagaggaggcgatgaaggaacgcagcgcgcagattcgcgccatcctgccggtgcca
gtggccacctacctgctcaacgagaagcgtgcggtacttgccgatatcgagcagcgccag
ggcgtgaaggtgctggtcctgcccaagcccgacatggacacgccgcactacgacgtgcaa
cgcctgcgtgacgaccatatcgaggaggaaggcgatcaggacaagtccagcttcgagctg
tcggtcgagaccgacatcggcaaggagccggacatgagcatcgccaaaccgatggcccgt
accgaggccgcggtcaagacggtgatccacaacgaaccggctccggcctccttgcagcag
gagccgccccgccaggcaccctcgcccgctcccgccactaccgcagcccccactgccggc
gtgctcggccgtctgctcaagggcgtcaccaagttgctcggcggaaccgagagcgatacg
accaccgcggcggagccgcgcaagccgaccccgccacaggcaccgccccgcagcgaggac
gaacgcggcgagcgcaacggtcgtggacggcggcgcgcgcgcggcgaatcccaggacgat
ggccgtagccagcgcggtcaggcccgcccccaggagagtgcccgtgccgaagcgcgtcag
gactctcgccaggaagcgcgccaggacagcagcggcggccgtggcggtcgcggccgcaat
caggcacgcgccgacaagccccaggccaccgaggaggcacgtcaggccaagcctcgcggg
cgtgacgagaccccgcgccgccagaaggccgagccacaggagaagcctgtcgaacaggta
accgagccggccaagagcgacgacggcaagcccaagcgtacgcgcaacaatccgcgcaac
cgctcgcgccagcacgccatcaatccgcaggccgaggctgagcagaagcgtctccaggcg
gaagcgcccgagcagaagggtgaagcaggttcggagcaggccaaggccgtgacgcccaag
ccggccgagcagcccaccgaggcgaccaaggccgagcagccaaagtcggaagaaaccaag
ccggaagccaagccggagcaggccaaggtcgaggcgcccaagccggccgagaagcccgcc
gaggcccccaagaccgagcagccgaagtcggaagaaaccaagcccgaagccaagcccgag
caggccaaggtcgaggcgcccaagccgaccgagaagcccgccgaagcggccaaggccgag
cagccgaagccggaagaaaccaagccggcaaccaagcccgagcaggccaaggtcgaggcg
cccaagccgaccgagaagcccgccgaagcgaccaaggccgagcagccgaagccggaagaa
accaagccggcaaccaagcccgagcaggccaaggtcgaggcgcccaagccggccgaaaag
cccaccgaggcgaccaaggccgagcagccaaattcggaagaagccaagcccgaagccaag
cccgagcaggccaaggccgaggcgcccaagccggacgagaagtccgccgaggcacccaag
gctgagcaaccaaagtcggaagaaaccaagccggaagccaagcccgaacaggccagggcc
gaggagaccaagccggccgaacagcccgccgaggcagacaaggccgagcaagccgaagcc
gagcagaccgctgcccgccgccggcgtcgcgcgcacaatgacccgcgcgaaatccgtcgc
cgtgagcaggaggcgcaaaaaggtagccagggctga
DBGET
integrated database retrieval system
