Komagataeibacter nataicola: B0W47_12160
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Entry
B0W47_12160 CDS
T04737
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
kna
Komagataeibacter nataicola
Pathway
kna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0W47_12160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kna03019
]
B0W47_12160
03009 Ribosome biogenesis [BR:
kna03009
]
B0W47_12160
Enzymes [BR:
kna01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
B0W47_12160
Messenger RNA biogenesis [BR:
kna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B0W47_12160
Ribosome biogenesis [BR:
kna03009
]
Prokaryotic type
rRNA processing factors
B0W47_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AQU88092
UniProt:
A0A9N7H1E8
LinkDB
All DBs
Position
complement(2504031..2506976)
Genome browser
AA seq
981 aa
AA seq
DB search
MSKRMLIDTTHAEETRVVVMDGNHLEDYDVEAASKKQLKGNIYLAKVIRVEPSLQAAFVD
YGGNRHGFLAFSEIHPDYYQIPVADREKLLALQEEERRAEEERRARDDEEEDAPRAEDEA
ETPAGDEDDEPETVGGENDTGDEAQRRIARFLRNYKIQEVIRRRQILLVQVVKEERGNKG
AALTTYVSLAGRYCVLMPNSLRGGGVSRKITSVADRRRLRDIITELSIPRGMAMIVRTAG
AQRPRAEIMRDCEYLLRLWDDIRQHTLESVAPALIYEEASLIKRAIRDIYTREVSEILID
GEPGWKSAREFMRMLMPQNAQKVRLWQDHEQTLFSHYKVEGLLDSMLSPSVQLKSGGYLV
INQTEALVAIDVNSGRATRERNIEETALRTNLEAAEEVARQLRLRDLAGLIVIDFIDMES
RKHNGMVERKLKDALRTDRARIQVGQISHFGLLEMSRQRLRPSIAESAFMPCPHCQGTGI
VRGIESSSLHVLRAIEDEGMQRKAAEITVQVAPEVAFYILNNKRTWLSEIETRHKMQVVF
APDATLQPPECKIERVRQQTARFEAPAAIAHAPAESSHVREIQIQAEPPVAAEATPEAPA
STEEDEDIASGTDHRRRRRRRRRRGSSATTAPEQTSETQQPAAEEPAPVPAPAPREVYRG
PTPADPYGDPIIDIFDVIEQTTAPAEIVEEVVEAEPAVVAVAEEEEAPRPRRRRRTRRRT
PVETEATTEAPQAEAEAEVSAPVAEEAPVEKAEAPPAAPAVEEAVAEPVEEAPKPRRRRA
STATTTRSSRSRTKAASTPEEKPAEAAAPDAAEEAAPAEEAAPAKPARKRAASRSTGTTT
ATPRRRTTRKTAAKADEATEAAAEAPVKAEVKAEAPATEEAPKRRRAPARRKKAEPAATE
AAEAPAEAVAETAEAAPAKPAPRKRATTRKAATTTTATATRTRRRKKAEDAAEPATAEAA
EPAAPTEAEAAPRRRTGWWKR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgcatgctgatcgacacgacccacgcggaagaaacccgcgtggtcgtgatg
gatggtaaccaccttgaggattatgatgtcgaagccgcttccaagaagcagctcaagggc
aacatctaccttgcgaaggttatccgtgtagaacccagccttcaggctgcgttcgtggat
tatggcggcaaccgccacggctttctcgccttcagcgaaatccaccccgattattaccag
atccccgtagccgaccgcgaaaagctgctcgcgctgcaggaggaggaacgccgcgcggaa
gaagaacgccgcgcgcgtgatgacgaggaagaggacgccccccgcgccgaggacgaggcc
gaaacccccgcgggcgacgaagacgacgagcccgaaaccgtgggcggcgagaacgacacc
ggcgatgaggcccagcgccgcatcgcccgcttcctgcgcaactacaagattcaggaagtc
atccgccgccgccagatcctgctcgtgcaggtggtcaaggaagagcgcggcaacaagggt
gcggctctgaccacctacgtatcgcttgcagggcggtactgcgtgctcatgcccaactcg
ctgcgtggaggcggcgtttcgcgcaagatcacctcggtagccgaccgccgccgcctgcgc
gacatcattaccgagctgtccatcccgcgcggcatggccatgatcgtgcgcactgccggc
gcccagcgcccgcgcgccgagatcatgcgcgactgcgaatacctgctgcgcctgtgggat
gatatccgccagcacacgctggaatccgtcgcccccgccctgatctatgaggaagcgagc
ctgatcaagcgcgccatccgcgatatctacacgcgcgaggtcagcgagatcctgatcgat
ggcgagccgggctggaagtcggcgcgcgagttcatgcgcatgctcatgccccagaacgcg
cagaaggtgcgcctgtggcaggaccacgagcagaccctgttctcgcactacaaggtggag
gggctgcttgattccatgctctcgccttccgtgcagctcaagtcgggtggctatctggtc
atcaaccagaccgaagcgctggtggcgatcgacgtgaactcgggccgcgccacgcgtgag
cgcaacatcgaggaaacggcgctgcgcaccaacctcgaagccgccgaggaagtcgcccgc
cagctgcgcctgcgtgacctggccggcctgatcgtgatcgacttcatcgacatggaaagc
cgcaagcataacggcatggtcgagcggaagctgaaagatgccctgcgcaccgaccgcgcg
cgcatccaggtgggccagatctcgcatttcggcctgctggaaatgtcgcgccagcgcctg
cgcccctccattgccgaatccgccttcatgccctgcccgcactgccagggcaccggcatc
gtgcgcgggatcgaaagctcgtcgctgcacgtgctgcgcgcgatcgaggacgaaggcatg
cagcgcaaggccgcggaaattaccgtgcaggtcgcacccgaggtcgccttctacatcctc
aacaacaagcgcacctggctttcggaaatcgagacgcggcacaagatgcaggtcgtgttc
gcacccgatgccacactacagccgcccgagtgcaagatcgagcgcgtgcgccagcagacg
gcccgcttcgaggcccctgccgccattgcacacgccccggccgaaagcagccacgtgcgc
gagatccagatccaggccgagccgccggtagccgccgaagcgaccccggaagccccggcc
agcacggaagaggacgaggatatcgcatcgggcaccgaccaccgccgccgccggcgccgt
cgtcgccgtcgtggctccagcgccaccaccgcgcccgagcagacgagcgagacgcagcag
cctgcagccgaggaaccggcacccgtgcccgctcccgcgccgcgtgaagtctatcgtggt
cccaccccggctgacccgtatggtgacccgatcatcgacatctttgacgtgatcgagcag
accacggcacctgccgagatcgtggaagaggttgtggaagccgaacctgcggtcgttgct
gtggcggaagaagaggaagcgcccaggccgcgccgccgccgccgcacgcgccgccgcacg
ccggtggaaacggaagccaccaccgaggccccgcaggccgaggcggaagccgaagtgagc
gcacccgtggccgaagaagcaccggtggagaaagccgaagccccccctgccgcaccggca
gtagaggaagccgtggcggaacccgtggaggaagcgcccaagccgcgccgccgccgcgcc
agcacggccaccaccacgcgcagcagccgcagccgcaccaaggccgccagcacgccggaa
gaaaagccggctgaggcagcagcacccgacgctgcggaagaagcagcccctgccgaggaa
gccgcacccgccaaacccgcgcgcaagcgtgcggcaagccggagcacgggcacgacgacg
gccaccccgcgccgccgcaccacccgcaagacggctgccaaggcggatgaggccactgag
gctgcggctgaagctcccgtgaaagcggaagtgaaagccgaagccccggcgacggaagag
gctcccaagcgccgccgtgccccggcacgccgcaagaaggccgagcctgccgccaccgag
gcagcggaagccccggcggaagcggtagccgagacggcggaagccgcaccggcaaagccc
gcgccgcgcaagcgtgccacaacccgcaaggccgccaccacaacgacggccacggccacc
cgcacgcgccgccgcaagaaggcggaagacgcagcggaaccggctacggccgaggcggcg
gaacctgccgcgccgaccgaagcggaagcggctccccgccgccgcacgggctggtggaag
cgctga
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