Kribbella qitaiheensis: F1D05_17840
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Entry
F1D05_17840 CDS
T06749
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
kqi
Kribbella qitaiheensis
Brite
KEGG Orthology (KO) [BR:
kqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kqi03016
]
F1D05_17840
Enzymes [BR:
kqi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
F1D05_17840
Transfer RNA biogenesis [BR:
kqi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
F1D05_17840
Prokaryotic type
tRNA splicing ligases
F1D05_17840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QNE19435
UniProt:
A0A7G6WZM0
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All DBs
Position
3834664..3835857
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AA seq
397 aa
AA seq
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MNVQYPVPLSGAKSSTLMWAQEHEVGAQALQQLRNIAALPWVYGVRVMPDVHLGKGATVG
SVIAMYQAVSPAAVGVDIGCGMEGVLTSLTASDLPDDLSGIRSRIEAAVPVGFHGHENAV
SMRKLGLDRGWDRFWGTFSSLHDGVQDREKKAQQQMGSLGGGNHFIEVCLDDDDRVWLML
HSGSRNIGKELAERHMRIAKALPHNADLPDRDLAVFLTGTPEMDAYRRDLTWAQEYASRN
RAVMLALVVQAVRESFDQPITFEQPISCHHNYVAEETIDDLDLLVTRKGAIRAGKGDLGL
IPGSMGTGSYVVRGLGSERSFYSASHGAGRRMSRNEAKRRYTVDDLIAQTAGVESRKDAG
VLDELPAAYKDIESVIAAQSDLVEVVAHLKQVICVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttcagtacccggtcccgctgagtggggccaagagctccactctgatgtgggct
caggagcatgaggtcggcgcgcaggcgctccagcagctgcggaacatcgccgcgctgccg
tgggtgtacggcgtacgggtgatgccggacgtccacctcggcaagggcgccacggtcggt
tcggtgatcgcgatgtaccaggccgtgtcgccggccgcggtcggggtcgacatcggttgc
gggatggagggtgtgctcacctcgctgacggcgtcggacctgccggacgacctgagcggg
atccggtcgcggatcgaggcggcagtaccggtcggtttccatggtcacgagaacgcggtg
agcatgcgcaagctcgggctggaccgtggctgggatcgcttctgggggacgttctcgagc
ctgcacgacggggttcaggaccgggagaagaaggcgcagcagcagatgggttcgctaggt
ggtggcaaccacttcatcgaggtctgcctggacgacgacgaccgggtctggctgatgctg
cactcgggttcgcgcaacatcggcaaggagctggccgagcggcacatgcggatcgcgaag
gcgctgccgcacaacgccgatctgccggaccgcgacctggccgtgttcctgaccggtacg
ccggagatggacgcgtaccggcgcgatctcacctgggcgcaggagtacgcctcacggaac
cgcgcggtgatgctcgccctggtggtgcaggccgtgcgggagtcgttcgaccagccgatc
accttcgagcagccgatctcgtgccaccacaactacgtggcggaggagacgatcgacgac
ctcgacctgctggttacccgcaagggcgcgatccgggccggcaagggcgacctcgggctg
atcccggggtcgatgggaaccggctcgtacgtcgttcgcggtctcggctcggagcgttcg
ttctactcggcctcgcacggggcaggccggcggatgagccgcaacgaggcgaagcgccgg
tacacggtcgacgacctgatcgcccagacggccggcgtcgagtcccgcaaggacgcgggt
gtgctcgacgagctgcccgcggcgtacaaggacatcgagtcggtcatcgcagcccagtcc
gacctggtcgaggtcgtcgcccacttgaagcaggtcatctgcgtcaagggttga
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