Lelliottia amnigena: A8A57_16980
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Entry
A8A57_16980 CDS
T04400
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
laz
Lelliottia amnigena
Pathway
laz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8A57_16980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
laz03019
]
A8A57_16980
Messenger RNA biogenesis [BR:
laz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A8A57_16980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ANG93998
LinkDB
All DBs
Position
complement(3652944..3653474)
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGESPEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLVSNDSEINMQTCSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMALQETAPKPQSAPAWRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccgaatgtaggtatcgtaatttgtaatcgtcagggc
caggttatgtgggcaagacggtatggtcagcactcctggcaatttccacaaggtggaatc
aacccaggagagtccccagaacaagcgatgtatcgggagctgttcgaagaagtcggctta
agccgaaaagatgttcgcatcctggcttcgacccgcaactggttgcgttacaagttaccg
aaacgtttggtgcgttgggacacaaagccggtttgtatcggccagaaacaaagatggttt
cttttgcaattggtaagcaacgattcagaaatcaatatgcaaacctgcagcacgccagag
ttcgacggctggcgctgggtgagctactggtatccggttcgtcaggtcgtctcatttaag
cgcgacgtttaccgtagggtgatgaaagagtttgcaagtgtggttatggcgcttcaggaa
accgctcctaagccgcaaagcgcacctgcctggcgacgtaaaagaggttaa
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