Lates calcarifer (barramundi perch): 108886254
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Entry
108886254 CDS
T04895
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X2
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00600
Sphingolipid metabolism
lcf01100
Metabolic pathways
Module
lcf_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108886254
Enzymes [BR:
lcf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
108886254
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
BLH_phosphatase
Motif
Other DBs
NCBI-GeneID:
108886254
NCBI-ProteinID:
XP_018536507
UniProt:
A0A4W6CZJ9
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Position
LG16_LG22:2004475..2014057
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AA seq
565 aa
AA seq
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MTSDSALEVYKEMVLLYLEEGRRQVNSRCADLEPWQIIGATLITTLGAVWIKGFLFQQES
LTSRIKKQCFRLIRKIPFVGASIQSQLNKALDDMSASLCTLKNGMSYAKQLPSKGLSQSQ
VLDKIREYETLNEVQWEKGCVSGAVYWGDETLTKLLVKVYGDFAWSNPLHPDIFPGVRKM
EAEVVRMSCTLFHGGPNSCGTVTSGGTESILMACKAYRDMAYERGVKYPEILAPVSVHAA
FNKAAHYFGMKLVHIPLDKKTMKVDVKAMKRAIGKNTAMLVCSAPQFPHGIMDPIEEVAK
LAVRYNLPLHVDACLGGFLIVFMAKAGYSLAPFDFRVKGVTSISADTHKYGYAPKGSSVI
LYSDKKYRHYQYFVAPDWQGGIYASPSIAGSRPGGIIAACWATMMHMGENGYIDATKKII
STARKIKTEIRKIKGVFVFGDPEVSVVAIGSDVFDIFRLSNALTSKGWNLNTLQYPSSIH
ICCTVLHTQPGVADQFIRDVKEQVAIIMKNPKEKTTGMGAIYGMAQSIPDRSMVTEISRG
FLDCLYSTEVSKTNTSHMNGNGKAH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgatagtgccttggaggtgtacaaggagatggtgctgctgtacctggaggag
ggacggcgacaggtgaactcgcgctgcgccgacctggagccgtggcagatcatcggggcg
acgctcatcaccacgctgggggccgtctggatcaaaggcttcctcttccagcaagaaagt
ctcacatcccgaatcaagaagcagtgctttcgactcatcaggaaaataccctttgttggc
gcgtcaattcagagccagctgaacaaggctttggatgacatgtctgccagtctgtgcact
ctgaagaacgggatgagctacgctaaacagctgccatccaaaggtctctctcagagccaa
gtgctggacaaaatcagagagtacgagaccctgaatgaggttcagtgggagaaagggtgt
gtttcgggcgcagtgtactggggcgatgaaaccctgaccaaactcctggtgaaggtgtat
ggagactttgcatggagcaacccacttcacccagacatctttcctggcgtgagaaagatg
gaggcggaggttgttagaatgtcttgcacgctcttccacggcgggccgaactcctgcggc
accgtgacgtcaggaggaactgagagcatactgatggcgtgcaaggcgtacagagacatg
gcgtatgaacgaggtgtcaagtaccctgagattctcgcccccgtgagcgtccacgccgcc
ttcaacaaagcagcacattactttggaatgaagctcgtgcacatcccgctcgacaagaaa
actatgaaagtggacgtgaaggctatgaagagagccatcggcaagaacacggccatgctc
gtgtgctcagcgcctcagttccctcacggaatcatggatcccatcgaggaagtcgccaag
ctggctgtgcgatacaacctcccgctgcatgtggacgcctgtcttggaggttttctcatt
gtgttcatggccaaggctggttattcgctcgccccgttcgacttcagggtaaaaggtgtt
accagcatctctgcagacacgcacaagtacggctacgcccccaaaggttcctctgtgatc
ctctacagcgataaaaagtaccgtcactaccagtactttgtagctccggactggcagggg
gggatctacgcctcaccctccatagctggctccaggccagggggaatcatcgccgcctgc
tgggcgaccatgatgcacatgggagagaacggatacatagacgccaccaagaagatcatc
agcacagcacgcaaaatcaaaacagaaatccgtaagataaaaggagtgtttgtgtttggg
gatccggaggtgtcggtggtggcgataggatcggatgttttcgatattttccgtctgtct
aatgcactgacgtcaaagggctggaatctgaacacgctgcagtacccatccagcatccac
atttgctgcacagtcttgcacacccagccgggggtcgccgatcagtttattcgtgatgtc
aaagagcaggtcgccatcatcatgaagaaccccaaagagaaaaccacggggatgggagcg
atctatggcatggcccagtccatcccagacagatccatggtgacggagatctccagaggc
ttcctcgactgtctctacagcactgaggtttccaagacaaacaccagccacatgaacggc
aacggtaaagcccactga
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