Lates calcarifer (barramundi perch): 108896439
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Entry
108896439 CDS
T04895
Name
(RefSeq) ankyrin-2 isoform X1
KO
K09255
ankyrin-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108896439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108896439
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
108896439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
UPA_2
ZU5
Death
Motif
Other DBs
NCBI-GeneID:
108896439
NCBI-ProteinID:
XP_050926594
LinkDB
All DBs
Position
LG5:complement(15404773..15488571)
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AA seq
1773 aa
AA seq
DB search
MSSSPEECHSRGGGSDRDLKMASSSNTSPEGGPPPPLHQNRIRQSDSNTSFLRAARAGNI
DKVLEFLKNGVDISTCNQNGLNALHLAAKEGHKDLVEELLERGAPVDSSTKKGNTALHIA
SLAGQREVVRLLVKRGADVNAQSQNGFTPLYMAAQENHLEVVRYLLENEGNQSIATEDGF
TPLAIALQQGHNSVVSLLLEHDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKM
MVNRTTESGFTPLHIAAHYGNVNVSTLLLNRGAAVDFTARNGITPLHVASKRGNTNMVAL
LLDRGAQIDAKTRDGLTPLHCAARSGHDPAVELLLERGAPILARTKNGLSPLHMSAQGDH
VECVKLLLQHKAPVDDVTLDYLTALHVAAHCGHYRVTKLLLDKKANPNARALNGFTPLHI
ACKKNRVKVMELLVKYGASIQAITESGLTPIHVAAFMGHLNIVLLLLQNGASPDVRNIRG
ETALHMAARAGQMEVVRCLLRNGALVDAMAREDQTPLHIASRLGKTDIVQLLLQHMAHPD
AATTNGYTPLHISAREGQVETAAVLLEAGASHSMATKKGFTPLHVAAKYGSLDVAKLLLQ
RKALPDDAGKNGLTPLHVAAHYDNQEVALLLLDKGASPHATAKNGYTPLHIAAKKNQTNI
ALALLQYGAETNVLTKQGVSPLHLAAQEGHAEMASLLLGKGAHVNTATKSGLTPLHLTAQ
EDRVSAAEVLAKHDANLDQQTKLGYTPLIVACHYGNAKMVNFLLQQGASVNAKTKNGYTP
LHQAAQQGNTHIINVLLQHGAKPNATTVNGNTALSIARRLGYISVVDTLKVVTEEVVTTT
TTVTEKHKLNVPETMTEILDVSDEEGEDTMTGDGGEYLRAEDLRELGDDSLPGHYLDGFS
YMSHNLDRQQHTPIHQSFHQGDRVLIEDMLTSHQVSALSREHEKDSFRLSWGAEHLDNVV
LSSSLLHSGRSSPCLDHDNSSFLVSFMVDARGGAMRGCRHNGLRIIVPPRKCSAPTRVTC
RLVKRHRLASMPPMVEGEGLAGRIIEVGPTGAQFLGKLHLPTAPPPLNEGESLVSRILQL
GPPGTKFLGPVIVEIPHFAALRGTERELVILRSETGESWREHHCDFTEEELNQILNGMDE
KLDSPEELEKKRICRIITRDFPQYFAVVSRIKQDSHLIGPEGGVLSSTLVPQVQAVFPEG
ALTKKIRVGLQAQPIDVEVVRKVLGNKATFSPIVTLEPRRRKFHKPITMTIPIPKSCNSD
GPSTVYSGETPTLRLLCSITGGTTPAQWEDITGSTPLTFVNQCVSFTTNVSARFWLIDCR
QIQESVSFASQLYREIICVPYMAKFVIFAKTLDPIEARLRCFCMTDDKMDKTLEQQENFT
EVARSRDVEVLEGKPIFADCFGNLVPLTKSGQHHVFSFFAFKENRLALFIKIRDTAQEPC
GRLSFTKEPRTYRSLNHNAICNLNITLPTYSKDSDSDQDADDESEKSDKKLDWQDDADRK
EETLAIIADLLGFSWTELARELEFSEDDIQLVRTENPNSLQEQSHALLQRWVEREGKHAT
EDCLIKRLTKINRMDIVHLIETQMNKSVQEQTSRTYAEIEKTLDHSEVSVALSSVQEDAD
SPRVVRRVESDRRPPPAVSEEDLSVASLLDIPSWAEPVGHTHSESMHGDLLEELEIPHEL
NPNLWTSEDVITPEPTCYDNSDEQADEMPDLPSQSVTKKSIRTKMDTLLSKGSPVKLFAS
VCPRMAWSMKRYHQKELRRDPSVWQREMDTPRL
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtagcccggaagaatgtcattccaggggcggcggctccgaccgtgacttgaaa
atggcctcttcgagcaacacgtctcccgagggtggacctccaccaccgctgcaccagaac
cgtatacggcagtccgacagtaacaccagtttccttcgagctgccagagcgggaaacatt
gacaaagtcctggaattcctgaaaaatggagttgacatcagcacctgtaaccagaatggt
ctaaacgctttacatctggcagccaaggagggacacaaagatttagtggaggaactgttg
gagagaggagcacctgttgactcttccaccaagaaaggaaacactgccctccatattgct
tcattggcgggacaaagagaggtagtccgactgctggtgaagagaggagcagatgtcaat
gctcagtcacagaatggcttcactccactctacatggcagcccaggagaaccacttggag
gtggtgagatacctgttggaaaatgaagggaaccaaagcattgcaacagaggatggcttc
actccactggccattgctctccagcagggccacaactcggtagtctccctgctgttggag
cacgacaccaagggcaaggttcgtctcccagccctgcacatcgcagcccgcaaagacgac
acaaagtctgctgcgctgctgctccagaatgaccacaacgccgacgtccaatccaagatg
atggtcaatagaaccacagagagtgggttcacccctctgcacatcgcggctcactatggt
aacgtgaatgtctccaccctgttgctgaacagaggagctgctgtggacttcacagccagg
aatgggataactcctctccatgttgcctccaagagaggcaacacgaacatggtggccctg
ctgctggaccgaggtgctcaaatagatgctaaaaccagggatgggctgactcccctgcac
tgtgcagccaggagtggacatgaccctgcagtagagctgctgctggagagaggagcaccc
atcctagccagaaccaagaacggactgtccccgctacacatgtcagcccagggagaccac
gtagagtgtgtcaaactcctgctgcagcacaaggcgcctgttgatgatgtcacgttggac
tacctcacagcgctgcacgttgcagctcactgtggccactacagagtcaccaagctgctg
ctagacaagaaggccaatcccaatgctcgagcactgaatggtttcactcccctccacatt
gcttgtaagaagaacagggtgaaggtgatggagctgttggtcaaatatggcgcctccatc
caggccattactgagtctggtctgactcccatccatgtagctgccttcatgggtcacctc
aacattgttctccttctgctgcagaatggagcctctcctgatgtccgtaacattcgtggt
gagacagctctccacatggcagcacgagcaggtcagatggaagtggtccgctgtttgctg
agaaatggagcgttggtggatgccatggccagggaggaccagactcccctccatattgca
tcccgtttggggaaaacagatatagtccaactgctgctgcagcacatggcccacccagat
gcagccaccaccaacgggtacactcccctacacatttcagccagggagggccaggtagag
actgctgctgtgctgctggaggccggagcctcgcactcaatggccaccaagaaaggattc
actccattacatgtagcagcaaagtatggaagcctcgacgttgcaaaacttctccttcag
cgcaaagctcttcctgatgatgcaggcaagaatggcctaactccgctacatgtggcagct
cattatgacaaccaagaagtagctctgctactgctggataaaggggcatcacctcatgct
actgcaaagaatggctacactcctcttcacattgcagccaaaaagaaccagacaaacatt
gcattggctctgctgcagtatggagcagagaccaacgttctgaccaagcaaggagtcagc
cctctacacctggcagcccaggaaggacatgctgagatggccagtctgctgctgggcaaa
ggagctcacgtcaacacagccaccaagagtggattgactcctctgcatctcacagcccaa
gaggacagagtcagtgcagcagaagtactggccaaacacgatgctaacttggatcagcaa
actaagcttggatatacccctctgatcgtggcttgtcactatggaaatgccaagatggtg
aacttcctattacaacaaggtgccagcgtcaatgccaaaaccaagaatggctacacacca
cttcaccaggcagcacaacaagggaacacacacataatcaatgttttgctgcaacatggg
gccaagcctaatgctactacagtgaatggaaacactgctctgtcaattgccagacgtctg
ggttacatctctgtagtggacacactgaaagttgtcactgaggaggtcgtcactaccaca
acgacggtcacagagaaacacaagctcaatgtccctgagaccatgactgagatccttgat
gtctctgatgaagaaggggaggacactatgacaggtgatggtggggagtatctgagagca
gaggatctcagagagctaggagatgactctcttccaggacactacttggatggcttcagc
tacatgagccacaaccttgacaggcagcagcacactcccattcaccaaagtttccatcag
ggagacagagttcttattgaagacatgcttacaagccaccaggtgtcagcactgtctaga
gagcatgaaaaggactcgttccgtctgagctggggtgctgagcaccttgataatgtggtg
ctgtcctccagtctgctacactctggccgttcctctccgtgcctagaccatgacaacagc
agcttcttggtaagcttcatggttgatgccaggggcggggccatgcgtggttgtcgccac
aacggcctgcgaatcattgtaccaccaaggaagtgttctgcacctacacgggtgacatgc
agactggtgaagagacaccgtctggcctctatgccccctatggtggagggtgagggcctc
gctggtcgtatcatagaagtgggacccacaggagctcagttcctgggtaagctccacctt
cccacagctccgccccctctgaatgagggtgagagcctggtcagtcgcatcctgcagctg
ggtcctccaggaaccaagttcctcgggcctgtgattgtggagatcccccattttgcagca
ctgcggggcaccgagagagagttggtgatcttgaggagtgagacaggggagagctggagg
gaacaccactgtgacttcacagaggaagagctgaaccagatactcaatggcatggatgaa
aaacttgattctccagaggagcttgagaagaaaagaatatgccgcatcatcacacgagac
ttcccacagtattttgcagtggtgtcacggataaagcaagacagtcatttgattgggcca
gagggtggggtccttagcagcactcttgtgccccaggttcaggctgtcttccctgaagga
gccctcaccaagaaaatcagagttgggctacaggctcagcccattgatgtggaggtggtg
agaaaggttcttggtaacaaagccacattcagtccaattgtcacattggagccaagaagg
aggaagttccacaaaccaatcaccatgacaatccctattcccaagagttgcaacagtgat
gggccgagcacagtatacagtggggagactcccactttacgtttgctttgcagtattaca
gggggaaccactcctgcccaatgggaggacatcaccggttccacacctctcacctttgtt
aaccaatgtgtttccttcactacaaatgtgtcagcaaggttttggttgatagactgcaga
cagatccaggagtctgtcagttttgcctcacagctgtacagagagatcatctgtgttcca
tacatggccaagtttgtcattttcgccaagacactggaccccattgaggcccgtctgcgg
tgtttctgcatgacagacgacaagatggacaaaaccctggagcagcaggagaatttcact
gaagttgcccgcagccgagatgttgaggtgctggagggaaaacctatatttgctgactgc
tttggaaacctggtgccacttaccaagagtggacagcaccatgtgttcagcttctttgcc
ttcaaagagaacagactggccctcttcatcaaaattagagacacagcacaggaaccatgt
ggtcgcctgtcgttcacaaaggaaccacggacataccgcagtcttaaccacaatgctatc
tgcaaccttaacatcaccctcccaacatactctaaggactcagattcagaccaagatgca
gatgatgagagtgagaagagtgacaagaaattggattggcaggatgatgctgacaggaaa
gaggagacattggctatcattgcagatcttcttggcttcagctggactgagctggcaaga
gagctggaattcagtgaggatgatatccaactagtgagaacagaaaatcctaattcactc
caagagcagagccatgccttgctgcagcgctgggttgagcgggaaggcaaacatgccaca
gaggactgtctgattaagcgactaaccaagatcaaccgcatggacatcgtccatcttatt
gaaacccagatgaacaaatctgtccaagagcaaacatctagaacttatgcagagatagaa
aagacactggatcacagtgaagtgtcagtagccctatcttcagtgcaagaagatgcagat
agtcccagagtcgtgagaagggtggaatcagaccgcagaccacccccagcagtttctgaa
gaggacctctcagttgcttccttattggatattccttcctgggcagagcctgttggacac
acccactcagaaagcatgcatggcgacctgttggaggagctcgagatcccgcatgaattg
aaccctaacctgtggacttcagaggatgtaattacaccagaacctacatgttatgacaac
tcagatgagcaagctgatgaaatgcctgacctaccctctcagtcagtgacgaagaaaagt
ataaggacgaaaatggacacattgttgtcaaaagggtcacccgtaaaattattcgcaagt
gtgtgtccgcggatggcatggagcatgaagaggtatcatcagaaggagctccgcagggat
ccatcagtgtggcagagggagatggatactccaaggttgtga
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integrated database retrieval system