Larimichthys crocea (large yellow croaker): 104926220
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Entry
104926220 CDS
T04659
Name
(RefSeq) exostosin-1a
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
lco
Larimichthys crocea (large yellow croaker)
Pathway
lco00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lco01100
Metabolic pathways
Module
lco_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
104926220
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lco01003
]
104926220
Enzymes [BR:
lco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
104926220
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
104926220
Glycosyltransferases [BR:
lco01003
]
Glycan extension
O-Glycan
104926220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin
Motif
Other DBs
NCBI-GeneID:
104926220
NCBI-ProteinID:
XP_010738331
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All DBs
Position
XIII:complement(22932625..22969104)
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AA seq
743 aa
AA seq
DB search
MQAKKRYLTLFSAGACLILLFCFGGIQVPLSRRGPNRRDDRSITGFHPGARWRRFPGSLQ
PFSSWEQDRSDDHNEHISPRQKRDANSGVYTGRRCRMDSCFDFSLCERNGFKVYVYPQQK
GEKMSESYQNILSSIEGSRFYTPDPGQACLFVLSLDTLDRDQLSPQYVHNLKAKIQSLPL
WNGGKNHIIFNLYSGTWPDYTEDLGFDIGLAMLAKASISTENFRPNFDVSIPLFSKDHPR
TGGERGYLKHNTIPPYRKYMLVFKGKRYLTGIGSDTRNALYHVHNSEDVVLLTTCKHGKD
WQKHKDARCDKDNAEYDKYDYREMLYNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNG
WELPFSEIIDWNTAAVIGDERLLLQIPSTVRSIHQDQILSLRQQTQFLWEAYFNSVEKIV
LTTLEIIQDRVLPHTSRSNLMWNSLPGGLFTLPQYSTYLGEFPFYYSKLGVKPYQKFTAI
IHVVTPLVSQSQPVMKLLVAVAKSQYCAQVIVLWNCDKPLPAKHRWPPTSVPVIVIEGES
KMISSRFLPYDTIPTDAVLSLDEDTVLSTTEVDFAFTVWQSFPDRIVGYPARSHFWDSNK
ERWGYTSKWTNDYSMVLTGAAIYHKYYHYLYTTYLPDSLKTMVDQMSNCEDILMNFLVSS
VSKLPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGTMPLVHSQMR
LDPVLFKDQVSILRKKYRDIERL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacggtacttaaccctgttctccgccggtgcgtgtctcattctgttg
ttttgttttggtgggatacaagtcccgctgtccagacggggtcccaaccggcgtgatgac
cgcagcatcaccggttttcatcccggggcgcggtggcgtcgcttcccgggttccctgcag
ccgttcagctcctgggagcaggaccggagcgatgatcacaatgaacacatatctcccagg
cagaagagggacgccaactcaggcgtgtacaccggcaggcgctgcagaatggattcctgc
tttgatttctccctgtgtgagaggaatggatttaaagtttatgtctacccccagcagaaa
ggggagaagatgtccgagagttatcagaacatcttgtcctccattgaaggatccaggttc
tatacacctgacccaggacaggcatgcctgtttgtcctgagtttggacactctggaccgg
gaccagctttcacctcagtatgtgcacaacttgaaagcaaaaatccagagcctccctctg
tggaacgggggcaaaaaccacatcatcttcaacttgtactctggcacctggccagactac
acagaagaccttggcttcgacatcggcctggccatgttggcaaaagccagtatcagcaca
gagaactttaggcccaactttgatgtttccatcccccttttctctaaggaccatcctagg
acaggaggggaaagggggtacctgaaacacaacaccattcccccttataggaagtacatg
cttgtttttaaggggaagaggtatctaaccgggataggctcagacactaggaacgcttta
tatcatgttcataactcagaggatgtggtcctcctcaccacctgtaagcacgggaaggac
tggcagaagcacaaggatgcacgctgtgacaaagacaacgcagagtatgacaagtacgac
tacagagagatgctgtacaactccacgttctgtctggtgcctcgaggacgacgactgggt
tcctttcgcttcttggaggctttgcaggcagcttgcgtgccagtgatgctgagtaatggc
tgggagcttcccttctcagagatcatcgactggaatacggcagctgtgattggggacgaa
aggctgctattacagatcccctcaacagtgcgttccattcaccaggatcagatcctgtcc
ctgagacagcagacccagttcctatgggaagcttacttcaactctgtggagaagatagta
ctgaccacactggagatcatccaggaccgggtcctgccgcacacctcaagaagtaacctc
atgtggaacagtcttcctggaggccttttcaccctgccccagtactccacatacctggga
gaattccccttctactactctaagctgggtgttaagccctaccaaaagtttacagcgatc
attcatgttgtaaccccactggtctcccagtctcagccagtcatgaagctccttgtggct
gtggccaaatcccagtactgcgctcaggtgatagttctgtggaactgtgacaagcctctt
ccagccaagcatcgctggcctcccacctcagttcctgttattgttatagaaggagaaagc
aagatgataagcagccgttttctgccctacgacaccatccccactgatgctgtactcagt
ctggatgaggacaccgtgctctccactacagaggtggactttgccttcacagtgtggcag
agtttcccagaccgcattgttggctacccagcccgcagccatttctgggacagcaacaaa
gagcggtggggctacacttccaaatggaccaacgattactccatggtgctgactggggct
gccatctatcacaaatactaccactacttgtacaccacctaccttccagacagtctgaag
accatggttgaccagatgtccaactgtgaggacattctgatgaattttctggtgtcctct
gtctcaaaactaccaccgatcaaggtcacccagaagaaacaatacaaggagactatgatg
ggacagagctcccgtgcgtctcgctgggctgaccctgaccattttgcccagcgtcagacc
tgcatgaacaagtttgccagctggtttggcaccatgcccctggtccactctcagatgagg
ctggacccggtcctgttcaaagaccaggtgtccatactgcggaagaagtacagggacatt
gagaggctataa
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