Lelliottia sp. WB101: DAI21_09165
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Entry
DAI21_09165 CDS
T05398
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
lew
Lelliottia sp. WB101
Pathway
lew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DAI21_09165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lew03019
]
DAI21_09165
Messenger RNA biogenesis [BR:
lew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DAI21_09165
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AVY97825
LinkDB
All DBs
Position
1914265..1914795
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AA seq
176 aa
AA seq
DB search
MIDDDGYRPNVGIVICNRQGQVMWARRYGQHSWQFPQGGINPGESPEQAMYRELFEEVGL
SRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSNDSEINMQTSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVIAFQEAPPKPQSPPAWRRKRG
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgacgatggctaccgcccgaatgtaggtatcgtaatttgtaatcgtcagggc
caggttatgtgggcaagacggtatggtcagcactcctggcaattcccgcaaggcgggatc
aatccaggagagtccccagaacaagcgatgtatcgggagctgttcgaagaagtcggctta
agccgaaaagatgttcgcatcctggcttcgacccgcaactggttgcgttacaagttaccg
aaacgtttggtgcgttgggacacaaagccggtttgtatcggccagaaacaaaagtggttt
cttctgcaattggtgagcaacgactcggaaatcaatatgcaaaccagcagtacgccagag
ttcgatggctggcgttgggtaagctactggtatcccgttcgtcaggtcgtgtcctttaag
cgcgacgtttaccgcagggtgatgaaagagtttgcaagtgtggtgattgcgtttcaggag
gcccctcctaaaccgcaaagcccacctgcctggcgacgtaaaagaggttaa
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