Leucobacter luti: K1X41_02455
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Entry
K1X41_02455 CDS
T08001
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
llut
Leucobacter luti
Pathway
llut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1X41_02455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llut03019
]
K1X41_02455
03009 Ribosome biogenesis [BR:
llut03009
]
K1X41_02455
Enzymes [BR:
llut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
K1X41_02455
Messenger RNA biogenesis [BR:
llut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K1X41_02455
Ribosome biogenesis [BR:
llut03009
]
Prokaryotic type
rRNA processing factors
K1X41_02455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Imm51
Motif
Other DBs
NCBI-ProteinID:
QYM76346
LinkDB
All DBs
Position
complement(526320..528836)
Genome browser
AA seq
838 aa
AA seq
DB search
MVKQTTSEPNEEPQRDAGSEAPEEVGAGIAPATQADETPTELTDVVPDAAADSDEATADA
ADAGVEAPADVTQDAADASAAPESPQASAHPQLVLPLADMSPQERFRATTRLIFLAPDVP
PVPPRPRRSELRPSELRQLDDILDQHMQPEVEQEEREQRSENRRTRRRSGGSEQQHSEDE
APRRPLRQAPLITEPQKVKGSTRLEAKKQRRRDGRDAGRRRMVITESEFLARRESVDREM
IVRTTADRVQIGVLEDKVLVEHYVARSSESSLIGNVYLGRVQNVLPSMEAAFVDIGRGRN
AVLYSGEVDWSEFEGGNTARKIENALKPGDQILVQVTKDPVGHKGARLTSQISLPGRFLV
YVPGGAMNGISRKLPDTERARLKKILKEVLPTGAGVIVRTAAEGATEDQLTHDVQRLTRQ
WESIQKRVAKGGGPVLLHSEPDMLIKIVRDVFNEDFQRLLISGEDTYTVIENYLSQVAPD
LLPRVERFTGERDVFDEYRVTEQIAKALDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFVG
SGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVLRRMVECLSRD
RTKHQVAEVTSLGLVQMTRKKLGLGLLESFSEPCDVCAGRGVIVHHEPVTKHRSEAPVRS
SKRSGRNGQQQHQQTPQPQQHHQDAKTAAQTHAISDGAKNMLAQVAASTIPASKHEEDSE
RHVSEPEQPAQQQRGQRATGRVPARSARNVEAEHDAGSSFTAPVQHAQPASGGNLLDSVL
NALPDAPSAGTGRARNRRVSTAPLRTGNDARPDDAQAAQLALAEALEATVRRKEHEEE
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagcagaccacatcagaaccgaacgaagagccgcagcgcgatgcgggctcagaa
gcgcccgaggaggtcggggcgggaatcgctccggcaacgcaggcggacgagacaccgacc
gagttgacggacgtcgtccccgacgcagctgccgactcggatgaagccacagcggacgca
gctgacgcgggtgttgaggcgcccgccgatgtgactcaggatgcagccgatgcctcggcc
gcaccagagagtcctcaggcgtcggctcatccgcagctcgtgttgccgctcgccgacatg
tcgccgcaggaacgtttccgtgcgacgacccggctgatctttctcgcgcctgacgtgccg
ccggttccaccgcgcccccgccgcagcgagctccgccccagcgagctgcgtcagctcgac
gacattctcgaccagcacatgcagccagaggtcgagcaggaagaacgcgagcagcgctct
gagaatcgccgcacccgccgtcgtagcggtggcagcgagcagcagcactccgaggacgag
gctcctcgccgcccgctccgccaggcgccgctgatcaccgagccccagaaggtgaagggc
tcgacgcgtctcgaagcgaagaagcagcgtcgccgtgacggccgcgatgccggccgccgc
cgtatggtgatcacggaatccgagtttctcgcgcgccgtgaatcagtcgaccgcgagatg
atcgttcgcaccacggcggatcgcgtgcagatcggtgtgctcgaggacaaagttcttgtt
gagcactacgtggcacgctcgagcgaaagctcgctcattggcaacgtctaccttggtcgc
gtgcagaacgtgctcccgagcatggaagcggccttcgttgatatcggccgaggacgcaac
gccgtgctgtactccggcgaggtggactggtctgaattcgagggcggcaacaccgcacgc
aagatcgagaatgcgctcaagccgggcgatcagattctcgtgcaggtcacgaaagatccc
gtgggccacaagggtgcgaggctcacgagccagatctcgctgccaggtcgcttcctggtt
tacgtgcccggtggggccatgaacgggatctcgcgcaaactgcccgataccgagcgtgcg
cgcctgaagaagatcctcaaagaggtgctccctaccggcgcaggcgtgatcgtccgcacc
gcggccgaaggagccaccgaggatcagctcacgcacgatgtgcagcgtttgacccgtcag
tgggaatcgatccagaagcgtgttgcgaagggtggcgggcccgttctgctgcactccgag
ccagacatgctgatcaagatcgtgcgagacgtcttcaacgaagacttccagcgcctgttg
atctcgggcgaggacacctacacggtgatcgagaactacctgtcgcaggtcgccccagat
ctgttgccgcgcgtcgagcgcttcaccggtgagcgggacgtgttcgacgagtatcgcgtc
acggagcagatcgccaaggcgctcgatcgcaaggtctggcttccctctggcggatcgctc
gtgatcgaccgcaccgaggccatgaccgtggtcgacgtgaacaccgggaagttcgttggc
tcgggcggtaacctcgaggagacggtgacgaagaacaacctggaggccgccgaggagatc
gtgcgtcagcttcggctacgcgacatcggtggcatcatcgtcgtcgacttcatcgacatg
gtgctcgaatcgaatcgggaccttgtgcttcgccgcatggtggagtgcctgagccgtgat
cgtacgaagcatcaggtcgccgaggtgacctcgctcggcctcgtgcagatgacccgtaag
aagctgggtctggggctgcttgaatcgttcagtgagccgtgcgacgtgtgcgcgggccgc
ggtgtcatcgtgcaccatgagcccgtgacgaagcatcgcagcgaagcaccggttcggagt
tcaaagcgcagcggtcgcaatggccagcagcagcatcagcagaccccgcagccgcagcag
caccatcaggacgcaaagactgcggcgcagacgcacgcgatttctgatggcgcgaagaat
atgctcgctcaggttgcagcttctacgatcccggcctcgaaacacgaggaagattccgaa
cgccacgtgtccgagcctgagcagccggcgcagcagcagcgcggccagcgcgccacgggc
cgagttcctgcccgctcagcgcggaacgtcgaagctgagcatgacgcgggttcatcattc
acagctcccgtgcagcacgcacagccggcgtcgggcggaaacctgctcgattctgtgctg
aatgcgctgcccgacgccccgagcgcgggaaccggacgggcgcggaatcgccgcgtctca
acggctccgctgcgtaccgggaacgatgcgcgtcccgatgacgcccaggcggcgcagctc
gcgctcgccgaggcgctggaggcgacggtgcgtcgcaaggagcacgaagaagagtga
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