Lonchura striata domestica (Bengalese finch): 110468778
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Entry
110468778 CDS
T05897
Symbol
GALNS
Name
(RefSeq) N-acetylgalactosamine-6-sulfatase
KO
K01132
N-acetylgalactosamine-6-sulfatase [EC:
3.1.6.4
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr00531
Glycosaminoglycan degradation
lsr01100
Metabolic pathways
lsr04142
Lysosome
Module
lsr_M00077
Chondroitin sulfate degradation
lsr_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
110468778 (GALNS)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110468778 (GALNS)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.6 Sulfuric-ester hydrolases
3.1.6.4 N-acetylgalactosamine-6-sulfatase
110468778 (GALNS)
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GFIT
Motif
Pfam:
Sulfatase
Sulfatase_C
Phosphodiest
SGSH_C
DUF229
Bys1
Motif
Other DBs
NCBI-GeneID:
110468778
NCBI-ProteinID:
XP_021382605
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All DBs
Position
11:1462605..1500374
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AA seq
500 aa
AA seq
DB search
MWSWRGTATSFGVFLLQMGWGDLGAFGEPSKETPNLDQMAADGMLFLDFYTASPLCSPSR
AALLTGRLPVRNGFYTTNGHARNAYTPQDIVGGIPDSELLLPELLKKAGYTNKIIGKWHL
GHRPQFHPLKHGFDEWFGSPNCHFGPYNSTERPNIPVYRDWEMVGRYYEDFKIDLKTGEA
NLTQLYLQEALDFISKQQASQQPFFLYWAIDATHAPVYASKQFLGTSQRGLYGDAVREID
DSIGKILKHLQQLGISESTFVFFTSDNGAALISAPKQGGSNGPFLCGKQTTFEGGMREPA
IAWWPGHIPAGGVSHQLGSVMDLFSTSLSLAGLQPPSDRQIDGIDLLPVILQGKLIDRPI
FYYRGNELMAVRVGLYKAHYWTWSNSWEEHSKGIDFCPGQSVAGVTTHTQEEHTYLPLLF
HLGRDPGEKYPLSFASEEYQRAVEHISGLVQQHKATLVPGQPQLNVCDQAVMNWSPPGCE
KLGKCLKAPESDPKKCSWPH
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgtggagagggactgcgacatcttttggtgtgttccttttacagatgggctgg
ggggatttgggagcttttggagagccttccaaggaaacccctaacctagaccagatggct
gcagatgggatgcttttcctggatttttatactgccagccccctctgctctccctcgagg
gcagcgctgctgacgggccggctcccagtcaggaatggcttttacaccacaaatggacac
gccaggaacgcatacacaccacaggatatagtaggagggatcccagattctgagttactg
cttccagagctcctgaagaaggctggttacaccaataagatcattggcaaatggcacttg
gggcaccggccccagttccaccccctgaagcacggctttgatgagtggtttgggtcccca
aactgccactttgggccctacaacagcacagagcgccccaacatccccgtctacagggac
tgggagatggttggcagatactatgaagacttcaaaattgatctgaagacaggtgaagcc
aacttgactcagctctacctgcaggaagctctggattttattagcaagcagcaggccagc
cagcagccattctttttatactgggcaattgatgctacccacgctcctgtttatgcctcc
aaacagttcctgggcacgagtcagagagggctgtatggggatgctgtgcgggagatcgat
gacagcattgggaaaatcctgaagcacctccagcagctgggcatcagtgagagcaccttt
gtgtttttcacctctgataacggggctgctctcatttcagctcccaaacaaggaggaagc
aatgggcctttcctgtgtggcaaacaaaccacctttgagggtggcatgagggagccagcc
atcgcctggtggcccggccacatccctgcaggaggggtcagccatcagctgggcagtgtg
atggatctgttcagcaccagcctctccctggcgggtctgcagcctcccagtgacagacag
attgatggcatcgaccttttacctgtcatcctgcagggcaagctaattgacaggcccatt
ttctattatcgtggcaacgagctgatggcagtgagagttgggctttacaaagctcactac
tggacctggagcaactcctgggaggagcacagcaagggcatcgatttctgtcctggccag
agcgtggctggagtgaccacccacacccaggaggagcacacctacctgcccctgctcttc
cacctgggcagggaccctggtgagaagtaccccttaagctttgccagtgaggagtaccag
cgggctgtggagcacatctcggggctggtccagcagcacaaggccaccctggtgccaggc
cagccccagctgaacgtgtgtgaccaggctgtcatgaattggtcccctccgggctgcgag
aagcttgggaagtgcctgaaagcaccagaatctgatcctaagaaatgctcctggcctcac
tga
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