Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_3299
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Entry
MMASJCM_3299 CDS
T03694
Name
(GenBank) integration host factor beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
mabl
Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Brite
KEGG Orthology (KO) [BR:
mabl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mabl03032
]
MMASJCM_3299
03036 Chromosome and associated proteins [BR:
mabl03036
]
MMASJCM_3299
03400 DNA repair and recombination proteins [BR:
mabl03400
]
MMASJCM_3299
DNA replication proteins [BR:
mabl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MMASJCM_3299
Chromosome and associated proteins [BR:
mabl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MMASJCM_3299
DNA repair and recombination proteins [BR:
mabl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MMASJCM_3299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BAP98075
LinkDB
All DBs
Position
complement(3297678..3298301)
Genome browser
AA seq
207 aa
AA seq
DB search
MNKAELIDVLTQKLGSDRRQATAAVEHVVDTIVRTVHKGESVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPTFRPGAQFKAVVSGAQKLPADGPAVKRGSTAAPAKRAAAKKAA
PAKKAPAKKAAPAKKAPVKKAVVKKAAPAKKAPVKKAVVKKAAPVKKAVTKAPAKKAATK
APAKKAATKAPAKKAPAKKAPAKKGRK
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagagctcatcgacgttctgacacagaagttgggctcggatcgccggcag
gccaccgctgcggtggagcacgtcgtcgacaccatcgttcgcaccgtgcacaagggtgag
agcgtgaccatcaccggattcggcgttttcgagcagcgtcgccgcgccgctcgtgtcgcc
cgcaacccgcgtaccggtgagaccgtcaaggtgaagccgacgtcggtgccgacgttccgt
cccggtgcgcagttcaaggcggttgtctctggtgcgcagaagcttccggccgacggcccc
gctgtgaagcgtggctccaccgccgccccggccaagcgcgccgctgccaagaaggccgcc
ccggccaagaaggctcccgccaagaaggccgcgcctgccaagaaggctccggtcaagaag
gcagtcgtcaagaaggccgctcccgctaagaaggctccggtcaagaaggcagtcgtcaag
aaggctgctccggtcaagaaggccgtgaccaaggctcccgccaagaaggccgcgaccaag
gctcccgccaagaaggccgcgaccaaggctcccgccaagaaggccccggccaagaaggct
ccggccaagaagggccgcaagtag
DBGET
integrated database retrieval system
