Paramagnetospirillum magneticum: amb2023
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Entry
amb2023 CDS
T00305
Name
(GenBank) Bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
mag
Paramagnetospirillum magneticum
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mag03032
]
amb2023
03036 Chromosome and associated proteins [BR:
mag03036
]
amb2023
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb2023
DNA replication proteins [BR:
mag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
amb2023
Chromosome and associated proteins [BR:
mag03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
amb2023
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
amb2023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BAE50827
UniProt:
Q2W5P8
LinkDB
All DBs
Position
complement(2199857..2200210)
Genome browser
AA seq
117 aa
AA seq
DB search
MHATELLTFASVVSFSIGHDNSIGGLMNKQDLVNKVAELSGLSKAAADNVIDATFAAITS
ALKAGDDVRLVGFGSFSVTQRAAKEGRNPRTGATIKIAASKAPKFTAGKGLKDAVNG
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgcaacagagttgttgacgttcgcatcggtcgtgtcattttcaatcggtcacgac
aattccattgggggtctcatgaacaagcaggatctggtgaacaaggttgccgagctcagc
ggtctgtccaaggctgccgccgacaatgtgatcgacgcgaccttcgccgccattacctcg
gcgctcaaggccggcgacgatgtccgcctggtcggtttcggttccttttcggtgactcag
cgcgccgccaaggaaggccgcaatccccgcaccggtgcgaccatcaagatcgcggcctcc
aaggccccgaagttcaccgccggcaagggtctgaaggacgccgtcaacggctaa
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