Magnetospirillum sp. XM-1: XM1_3638
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Entry
XM1_3638 CDS
T04231
Symbol
hupB
Name
(GenBank) HU, DNA-binding transcriptional regulator, beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
magx
Magnetospirillum sp. XM-1
Brite
KEGG Orthology (KO) [BR:
magx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
magx03032
]
XM1_3638 (hupB)
03036 Chromosome and associated proteins [BR:
magx03036
]
XM1_3638 (hupB)
03400 DNA repair and recombination proteins [BR:
magx03400
]
XM1_3638 (hupB)
DNA replication proteins [BR:
magx03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XM1_3638 (hupB)
Chromosome and associated proteins [BR:
magx03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
XM1_3638 (hupB)
DNA repair and recombination proteins [BR:
magx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
XM1_3638 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
2C_adapt
DUF2267
Motif
Other DBs
NCBI-ProteinID:
CUW40699
UniProt:
A0A0U5MM03
LinkDB
All DBs
Position
I:complement(3635152..3635424)
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AA seq
90 aa
AA seq
DB search
MNKNDLVTAVAGAAGLSKADAAKAVDGVFEAITSALKGGDEVRLVGFGTFAVASRAASEG
RNPRTGEKIKIPASKQPKFKAGKGLKDGIQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagaacgatctcgtgacggccgtggctggcgccgctggtctgtccaaggccgat
gcggctaaggccgtggacggtgttttcgaagccatcacctccgcgctgaagggcggcgat
gaggttcgtctggtcggtttcggcactttcgccgtcgcgtcgcgcgcggcgtccgagggc
cgcaatccccgcaccggcgaaaagatcaagattccggcctccaagcagccgaagttcaag
gctggcaagggcctgaaggacggcatccagtaa
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