Myxocyprinus asiaticus (Chinese sucker): 127436868
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Entry
127436868 CDS
T08782
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai-like isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
masi
Myxocyprinus asiaticus (Chinese sucker)
Brite
KEGG Orthology (KO) [BR:
masi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
masi03019
]
127436868
04131 Membrane trafficking [BR:
masi04131
]
127436868
04121 Ubiquitin system [BR:
masi04121
]
127436868
Enzymes [BR:
masi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127436868
Messenger RNA biogenesis [BR:
masi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
127436868
Membrane trafficking [BR:
masi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127436868
Ubiquitin system [BR:
masi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127436868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
AraC_N
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
127436868
NCBI-ProteinID:
XP_051547293
LinkDB
All DBs
Position
47:complement(17553698..17562433)
Genome browser
AA seq
490 aa
AA seq
DB search
MDHNADNDMQGTEGPLGGPDVRRRIPIKLLPKQTRIKPLRPQRPAGRLPSKTHSADEEGF
NYKQKERFDSCSKAGDAFASQRRFPQQLFWDYKLNLIGKKDDIPVHLCDKCGLPIKTYGR
MIPCKHVFCYECALHHERKGDKMCPGLNLYSCTDPVQRIEQCQRGSLYMCSIVQGCKRTY
LSQRDLQAHINHRHMRSGKTSSSRSDPLHLPPTSEVPERFRVPPPHLPKPHVLIPPPLSH
GGHDPYSQPSPGSHDDLRPPQGQPPNAADMGPSRSLAQETFRISTVTTRKHSNLITVPIQ
DDSSSGHSHEPHPQPGSAPPPHHHPGDYQGQPVVTHPHHMMAPPQQHYGPPPPPPPISHP
MPHPGQGSNTPHMVFNQAPPPLSSVPPPITPPPGHLIGQMPPFMNHPPPGPPPQHGGHPV
NGPPPHHYNPQFPEDKSTLSPPFNQPGGLSPGMWPAPRGPPPPRMQGPPPQGQMPGLHHP
DQGRYRPYYQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggaccacaatgcagacaacgatatgcagggcacggagggtccgttaggtggtcctgat
gtcaggaggaggatcccaattaaactccttcccaaacagaccaggattaaacctctgcga
ccgcagagacctgctggacggttaccttccaaaacccattctgctgatgaagaaggcttt
aactacaagcagaaagagaggtttgatagttgctcaaaagcaggtgatgcatttgcaagc
cagcgacggttcccacagcagctgttctgggattacaagctaaacttgattggcaaaaaa
gatgacatcccagttcatttgtgtgacaaatgtggactgccaattaaaacatatggtcgt
atgatcccatgcaaacatgttttctgctatgagtgtgcattgcatcatgaaagaaagggt
gataagatgtgtccaggtctaaacctgtacagctgtacagacccagtccagcggattgag
cagtgccagcgtggctctctctacatgtgtagtattgttcagggctgcaaacgcacttac
ctctctcagagagacctgcaggcccacattaatcacagacatatgaggtcaggcaagaca
tctagcagccgatctgaccctctccaccttcctcctacctcggaggtgcctgagcgcttc
cgtgtacccccacctcacctgccgaaaccccatgtactcatccctcccccgctgtctcac
ggtggtcatgacccttacagccagccttcccctggctcccatgatgacctccgacctcca
caaggccagccacctaatgcggcagatatggggccgtcccgctctctcgctcaagagacc
ttccgcatctcaacggttaccacacggaaacacagcaacctcatcacggttccaatccag
gatgattcaagctctggtcactcacatgagccacacccccagccaggcagtgctccgccc
cctcaccaccaccctggagactatcaagggcagcctgttgttacccacccacatcacatg
atggcaccgcctcagcagcactatgggcccccacctccccctccgccaatcagtcacccc
atgccacacccagggcagggctccaacacaccccatatggtttttaaccaagcaccccct
ccactgtcatctgtccccccacccattactccacctcctggacacctcattggtcagatg
cccccttttatgaaccaccctccaccagggcctccccctcagcacggaggtcaccctgtc
aatggccctccaccccaccattacaacccccagttccctgaggacaagagcactctcagt
ccaccgttcaaccagcctgggggtttgagtccaggaatgtggcctgcaccccgggggccc
ccaccaccccgaatgcagggccccccaccacagggacagatgcctgggctacatcaccca
gatcagggccgctatagaccatattaccagtaa
DBGET
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