Mycolicibacterium aurum: NCTC10437_03726
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Entry
NCTC10437_03726 CDS
T06794
Symbol
rng
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mauu
Mycolicibacterium aurum
Pathway
mauu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mauu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10437_03726 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mauu03019
]
NCTC10437_03726 (rng)
03009 Ribosome biogenesis [BR:
mauu03009
]
NCTC10437_03726 (rng)
Enzymes [BR:
mauu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NCTC10437_03726 (rng)
Messenger RNA biogenesis [BR:
mauu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC10437_03726 (rng)
Ribosome biogenesis [BR:
mauu03009
]
Prokaryotic type
rRNA processing factors
NCTC10437_03726 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
VEG56729
UniProt:
A0A448IWG6
LinkDB
All DBs
Position
1:complement(3978568..3981546)
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AA seq
992 aa
AA seq
DB search
MADNDNFEASTQDFTEEPRLAADSSAEAKDAPPPEKLRVHSLARVLGTTSKRIIDALREV
DGRSRSAHSTVGPDEADRVRQALAEPEPAAEAAQPDDPQPDVAPAAAPEPVAEVPEPVAE
VPEPAAEVPEPAADAPAEDEPESRLILETPASRPAVEPADYLPLFVAPQPVRFDDVARDA
DDSDDDDSDDDDDSDSDSDDDQSGRPTAKRRRRGRRGRGRGRGEQNGDEPATDSDADESD
GEKSDSGDESDDSDDDNGDDDGSGGDAGSRRRRRRRRRKSGSGDDSDNGSTPDDPPNTVV
HEREPRKSGRGDRSDKSDRDEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLAR
REAVERVMVVRDKVRSEPPHEGSRYTQIAVMEDGVVVEHFVTSAASASLVGNIYLGIVQN
VLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGAQRKIEQALKPGDYVVVQVSKDPVGH
KGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPADAGVIIRTASE
GVKEDDIRTDVERLQKRWTEIEAKAAGISEKKAGAAVALYEEPDVLVKVIRDLFNEDFSG
LIVSGDDAWQTINDYVTSVAPELLPRMTKYEPAGSEAPDVFAVHRIDEQLTKAMDRKVYL
PSGGTLVIDRTEAMTVVDVNTGKFTGSGGNLEQTVTRNNLEAAEETVRQLRLRDIGGIVV
IDFIDMVLESNRDLVLRRLTEALGRDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSTTC
THCQGRGIMLHGDPVDTASAMASAGRKAAEPGTGRRSKRGKRGAAKAEPEVQVAKVPAHL
PGEHPMFKAMAAANGKPEGDEESDDDFDATQAPEEVGELDTDATPAVTGELDDEFGDDAD
EDDADDADEDDSDDEDEAGEIDLDDEDDDDEDDDIDDLDDEDDEDDDEDGDLDDDDDDDD
DDEDDEDEPVAVPAGRQRRRAAARPAGPPSGD
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaatgacaattttgaagcgtcaacccaggacttcacggaggagccacggctc
gccgctgactcctctgctgaggccaaggatgcgccaccgcccgagaagctgagggttcac
tcgctggcccgggtgctgggcaccaccagcaagcggatcatcgacgccctccgggaggtg
gacggtcgctcgcgcagcgcgcactcgacggtgggccctgacgaggccgaccgcgtgcgc
caggcgctcgccgagcccgagcccgccgcggaggctgctcagcccgacgatccccagccg
gacgtagcaccggccgccgcacccgagccggttgccgaggttcccgagccggtcgccgag
gttcccgaaccggccgccgaggttcccgaaccggccgccgacgcgccggccgaggacgag
ccggagtcccggttgatcctggagacgccggcctcgcggccggccgtcgagcccgccgac
tacctgccgcttttcgtcgcgccgcagcccgtccggttcgacgacgtcgcccgggacgcc
gacgacagcgacgatgacgattccgacgacgacgatgattcggattccgactccgatgac
gaccagtcgggccgtcccaccgcgaaacgccgccggcggggacgccggggccgtggccgc
ggccgcggcgaacagaacggcgacgagccggccaccgactccgacgccgacgagtccgac
ggtgagaagtccgacagcggcgacgagtccgatgactccgacgacgacaacggcgatgac
gacggctcgggcggcgacgcaggcagccgccgtcggcgccgtcgccgtcgccgcaagtcc
ggctcgggcgacgactccgacaacggatccaccccggacgatccgcccaacaccgtggtc
cacgagcgggagcccaggaagtccggccggggcgaccggtccgacaagtccgaccgggac
gagatccagggcatcagcggttcgacgcgactggaggccaagcggcagcggcgccgggac
ggccgcgacgcgggccggcgccgcccacccatcctcagcgaagccgagttcctggcccga
cgcgaggctgtcgaacgcgtcatggtcgtccgcgacaaggtgcgcagcgagccgccgcac
gaaggctcccgatacacccagatcgcggtcatggaggacggcgtcgtcgtcgaacacttc
gtgacgtcggcggcttcggcgtccctggtcggcaacatctacctgggcatcgtgcagaac
gtgctgccgtcgatggaggcggccttcgtcgacatcggccgcggtcgcaacggcgtgctg
tacgccggcgaggtcaactgggaggctgcgggcctcggcggcgcgcagcgcaagatcgag
caggcgctcaaaccgggcgactacgtcgtcgtgcaggtcagcaaggatccggtaggacac
aagggtgcacggctgaccacgcaggtctcgctggcgggccgttacctggtgtacgtgccg
ggggcatcctcgaccggcatcagccgcaagctgcccgacaccgagcggcagcggctcaaa
gagattctgcgtgaggtggtccccgccgatgcgggcgtgatcatccgcacggcgtccgag
ggcgtcaaggaagacgacatccgcaccgatgtcgagcggctgcagaagcgctggacggag
atcgaggccaaggccgccgggatcagcgagaagaaggccggcgccgcggtggcgctctac
gaagagcccgacgtgctggtcaaggtgatccgcgacctcttcaacgaggacttctccggc
ctcatcgtgtcgggcgacgacgcatggcagaccatcaacgactacgtgacgtccgtcgcg
cccgagttgcttccccggatgacgaagtacgagccggccggttcggaggcgcccgacgtc
ttcgccgtgcaccggatcgacgaacagctcaccaaggcgatggatcgcaaggtgtatctg
ccgtccggcggcacgctcgtgatcgaccgcaccgaggccatgaccgtcgtcgacgtcaac
actggcaagttcaccggttccggcggcaatctcgagcagacggtcacgcgcaacaacctg
gaggctgccgaggagacggtgcgccaactgcggctgcgcgacatcggcggcatcgtggtc
atcgacttcatcgacatggtgctggaatccaacagggatctggtgctgcgccggctgacc
gaagcgctgggccgggaccgcacacgacaccaggtgtcggaggtgacctcgctcgggttg
gtccagctgactcgcaagaagctgggtaccggcctgatcgaggcgttctccaccacctgc
acgcactgccagggtcgcggcatcatgctccacggcgatcccgtggacaccgcgtcggcc
atggcgagcgccggccgcaaggccgcagaaccgggcaccgggcgacgcagcaagcgcggc
aagcgtggtgccgcgaaagccgagccggaagtccaggtggccaaggtccccgcgcacctg
ccgggtgagcatccgatgttcaaggcgatggccgcggccaacggcaagcccgagggcgac
gaggaatccgacgacgacttcgacgcgacgcaggcgcccgaagaggtcggcgagctcgat
accgacgccacacccgcggtgaccggcgaactcgacgacgagttcggcgacgacgccgac
gaggacgacgccgacgacgccgacgaggacgactcggacgacgaggacgaggcaggcgag
atcgatctcgacgacgaggacgacgacgacgaggacgacgacatcgatgacctcgacgat
gaggatgacgaggacgacgacgaggacggcgatctcgacgacgacgacgatgatgacgat
gacgatgaggatgacgaggacgagcccgtcgccgtcccggcaggccgtcagcggaggcgc
gcggcagcgcggcccgctggtccgccaagtggtgactga
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