Mycobacterium branderi: MBRA_33640
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Entry
MBRA_33640 CDS
T07397
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mbrd
Mycobacterium branderi
Pathway
mbrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MBRA_33640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbrd03019
]
MBRA_33640
03009 Ribosome biogenesis [BR:
mbrd03009
]
MBRA_33640
Enzymes [BR:
mbrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MBRA_33640
Messenger RNA biogenesis [BR:
mbrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MBRA_33640
Ribosome biogenesis [BR:
mbrd03009
]
Prokaryotic type
rRNA processing factors
MBRA_33640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BBZ13169
UniProt:
A0A7I7W6I1
LinkDB
All DBs
Position
3441477..3444170
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AA seq
897 aa
AA seq
DB search
MIDGAPSSDLPENPSEREDLPDRLRVHSLARALGTTSRRVLDALTELDGRIRSAHSTVDR
ADAVRVRDLLAAAPAPDAQVGEAAEPESRLMLETTAERPEYMPLFVAPQPIEIADDSDDA
DDSDSDDDTDESDEEQADRPAGRRRRRGRRGRGRGRGEQGAGDARGQGDDGDDDQDSGEA
DDTDDTDSDDNNATETATRRRRRRRRRKSGSGDDTDDGPSPDDPPNTVVHERAPRADKDA
ADSDSGEIQGINGSTRLEAKRQRRRDGRDAGRRRPPVLTEAEFLARREAVERVMVVRDKV
RTEPPHPGARYTQIAVLEDGIVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGR
GRNGVLYAGEVNWEAAGLGGANRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGR
YLVYVPGASSTGISRKLPDTERQRLKEILREVVPPDAGVIIRTASEGVKSEDIRADVNRL
QERWAQIEAKAAETKEKAAGAAVALYEEPDVLVKVIRDLFNEDFAELIVSGDEAWNTINE
YVNSVAPELVSKLNKYESADGGPDVFAVHRIDEQLAKAMDRKVWLPSGGTLVIDRTEAMT
VVDVNTGKFTGSGGNLEQTVTKNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLV
LRRLTEALARDRTRHQVSEVTSLGLVQLTRKRLGTGLIEAFSTTCPHCSGRGITLHADPV
DSTSATGRKSEGRRGRRSKKGKADEVPVAKVPAHAPGEHPMFKAMAAANGRHDGDSEDAE
APTPGEEPDTQAEEEVAREVADEDLDDTDFDETEDEDEVELDDDEDIEEDLDDEDDEDLD
LDDDLDVDSEDSDEPEESDSDSEDEDAADQPVVASVVERPRRRRAAARPAGPPIHED
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgatagacggtgccccatcctcagaccttccagaaaacccgtccgagcgcgaggacctg
cctgaccggctgagggtccactcgctggcccgagcgctgggcacgaccagcagacgggtg
ctcgacgcgctcaccgagctcgacggccggatccgcagcgcgcattccaccgtcgaccgc
gccgacgcggtccgggttcgcgatctgctggccgccgcaccggcccccgacgcccaggtc
ggcgaggcggccgaacccgagtcgcgcctgatgctggagacgacggccgagcgccccgag
tacatgccgttgttcgtcgcgccgcagccgatcgagatcgccgacgactccgacgacgcc
gacgattccgactccgacgacgacaccgacgaaagcgacgaggagcaggccgaccgcccg
gccggccggcgccgccgccggggccgtcgcggccgtggccgcggacgcggtgagcagggc
gcaggagacgcccgcgggcagggtgacgacggcgacgacgaccaggattccggggaggcc
gacgacaccgacgacaccgacagcgacgacaacaacgcgaccgaaaccgcgacccgccgc
cggcggcgccgtcgtcgccgcaagtccgggtccggcgacgacaccgacgacggcccgtcg
cccgacgatccgcccaacaccgtcgtccacgagcgcgcaccgcgcgccgacaaggacgcc
gccgacagcgacagcggcgagatccagggcatcaacggctcgacgcgtctggaagccaaa
cggcagcgccgccgcgacgggcgtgacgccgggcggcgccgccctccggtgctgaccgag
gccgagtttctggcccgccgcgaggcggtcgagcgggtgatggtggtgcgcgacaaagtg
cgcaccgagccgccgcaccccggcgcccgctacacccagatcgccgtgctcgaggacggc
atcgtcgtcgaacactttgtgaccagcgcggcctcggcgtcgctggtgggcaacatctac
ctgggcatcgtgcagaacgtgctgccgtcgatggaggcggcgttcgtggacatcggcagg
ggtcgcaacggtgtgctctacgccggtgaggtcaactgggaagccgccgggctgggcggt
gccaaccgcaagatcgagcaggccctcaagcccggcgactacgtcgtcgtccaggtgagc
aaggatcccgtcggccacaagggcgcccggctgaccacccaggtgtcgctggccggccgc
tacctggtgtacgtgccgggcgcgtcgtcgacggggatcagtcgcaagctgcccgacacc
gaacgccagcggctcaaggagatcctgcgcgaggtggtgccgcccgacgccggggtcatc
atccgtaccgcgtccgagggcgtcaaatccgaagacatccgcgcggacgtcaaccggctg
caggagcggtgggcgcagatcgaggccaaggccgccgaaaccaaggagaaggcggccggt
gccgcggtcgcgctctacgaagagcccgacgtgctggtcaaggtcatccgcgacctgttc
aacgaggacttcgccgagctgatcgtgtctggcgacgaagcctggaacaccatcaacgaa
tacgtgaattcggttgcgcccgaacttgtttcgaaactgaacaaatacgagtctgccgac
ggcggcccggacgtgttcgccgtgcaccgcatcgacgagcagctcgccaaggcgatggac
cgcaaggtgtggctgccctcgggcgggacgctggtgatcgaccggaccgaggcgatgacc
gtcgtcgacgtcaacaccggcaagttcaccggatctggcggcaacctcgagcagaccgtc
accaagaacaacctggaggcggccgaggagatcgtgcgtcagctgcggctgcgcgatatc
ggcggcatcgtggtcatcgacttcatcgacatggtgctcgagtccaaccgcgatctggtg
ctgcgccggctcaccgaggcgctggcccgcgaccgcacccgccaccaggtgtccgaagtg
acgtcgctgggtctggtgcagctgacccgcaagcggctgggcaccgggctgatcgaagcg
ttctccaccacctgtccgcactgcagcggccgcgggatcacgctgcacgccgacccggtc
gactccacctcggcgaccggccgcaagtccgagggcaggcggggccggcggtccaagaag
ggcaaggccgacgaggtgcccgtggccaaggtgcccgcgcacgcgccgggtgagcacccg
atgttcaaggcgatggccgcggcgaacggccgccacgacggcgactccgaggacgccgag
gcgccgacacccggcgaagaacccgacacgcaggccgaagaggaagtcgctcgtgaggtt
gccgacgaggatctggacgacaccgacttcgacgaaacagaagacgaggacgaggtcgag
ctcgacgacgacgaggacatcgaggaggacctcgacgacgaggacgacgaagacctcgac
ctcgacgacgacctcgacgtcgactcggaggactccgacgagcccgaggagtccgattcc
gattccgaggacgaggacgccgcagaccagcctgtcgtcgcgtcggttgtcgagcggccg
cgccgacgtcgggcagcggctcgtccggcggggccgccgatccacgaggactag
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