Mus caroli (Ryukyu mouse): 110285486
Help
Entry
110285486 CDS
T05910
Symbol
Pdzd7
Name
(RefSeq) PDZ domain-containing protein 7
KO
K21882
PDZ domain-containing protein 7
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcal03037
]
110285486 (Pdzd7)
04990 Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
110285486 (Pdzd7)
Cilium and associated proteins [BR:
mcal03037
]
Primary cilia and associated proteins
USH complex and associated proteins
110285486 (Pdzd7)
Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
110285486 (Pdzd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
TP2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
110285486
NCBI-ProteinID:
XP_021007339
Ensembl:
MGP_CAROLIEiJ_G0023010
UniProt:
A0A6P5NYL8
LinkDB
All DBs
Position
19:complement(41692313..41712543)
Genome browser
AA seq
1023 aa
AA seq
DB search
MARGFTVGFDPLGLGELSSGSLSSVSSRGHLGSDSGSTATRYLLRKQQRLLNGPSRGIRA
SSPMGRVILINSPIEANSDESDIIHAVCVEKSPSGRLGFSVRGGSEHGLGIFVSKVEEGS
SAERAGLCVGDKITEVNGLSLESTTMGSAVRLLTSSSCLHMMVRRMGRVPGIKFSKEKTT
WVDVVNRRLVVEKCSSTPSDRSSEDGVRRIVHLYTTSDDFCLGFNIRGGKEFGLGIYVSK
VDHGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHIMLTIKETGRYPAYKEM
VSEYCWLDRLSNGVLQQLSPASESSSSVSSYASSAPCSSGSLPSDRMDVCLGPEEPTSHG
PGWGRADTAMQTEPDLDSRVETWCSVRPTVILRDTAIRSSTRHLDSALSESPKTALLLAL
SRPRPPITRSQSHLTLWEEKKQRKKEKSGSSGEKGALQRSKTLMNLFFKGGRQGRPAGDG
HREAWTLDSRSPTKVRPRLDLEKAGSVGPVQKFVTWRLRRDRERGRALLSTRSGSPSGQA
PTVNEQVQAWESRRPLIQDLARRLLTDDEVLAVTRHCSRYVHEGGVEDLVRPLLAILDRP
AKLLLLRDIRSVVAPTDLGRFDSMVMPVELEAFEALKSRAVGPSALRPTRQDTPPKRHLI
TPVPDSRGGFYLLPVNSSEDEDGEIREKLGVLKVSLGASAPHHKGIPPLQDVPVDAFSLR
RGACAPPPQPPPVAPRPPRPNWLLTEPPSREDTQQNQSQTPAQSCSRSRSRSRSRSRSRS
RSRGQGKSPGRRRSPSPAPITTAATANGRYHRPRKARPLLPRPLDGQVAKVGARQGSLEN
GIGRIAEEAVGNVSTGALRTVTLSKMKQSLGISISGGIESKVQPMVKIEKIFPGGAAFLC
GNLQAGFELVAVDGESLEQVTHQRAVDTIRRAYRNKAREPMELVVRVPGPGLLPLASDLR
AVKDQSLAPDSPSTHGPVDDARIPTQLPPPEARQLQQSLSSALKVPQSIPKLSPILKNPH
DPS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtggtttcacggtaggttttgatccactgggtctaggagaactcagctctggc
tccctgagctctgtctcctcccgaggccacctgggcagcgactcaggctccacagcaaca
cgatacctgctgaggaagcagcagcgcctgctgaatgggccctcccgaggaattcgagcc
tcctcgcccatgggccgtgtcatcctcatcaactcccccattgaagccaacagtgacgaa
agtgacatcatccacgccgtttgtgtggagaagagcccctcggggaggctgggtttcagc
gtgagaggcggctctgagcatggcttgggtatctttgtcagcaaggtggaggagggaagc
agcgcagagcgggctggcctgtgtgtgggagacaagatcacggaggtgaacgggctaagc
ctagagagcaccacaatggggagcgctgtgcggctgctgaccagtagcagctgcctacac
atgatggtaaggcgcatgggccgagtgcccggcatcaagttctccaaggagaagaccaca
tgggtggatgtagtgaaccggcggctggtggtagagaagtgcagttcaacgccatcggac
cgcagctcggaagacggtgtgcgccgcatcgtccatctctatacaacctcggatgacttc
tgcctaggtttcaacatccgagggggcaaggagtttggcctgggcatctacgtgtccaaa
gtggaccatgggggcctggctgaagagaatggcatcaaagtgggggaccaggtcctggca
gccaacggtgtcaggttcgatgacatcagccacagccaggccgtggaggtgctgaagggc
caaacgcacatcatgttgaccatcaaggagaccggccgataccctgcctacaaagagatg
gtttctgagtactgctggctggatagattgagcaatggggtactgcagcagctgtcgcca
gcctccgagagcagctccagcgtctcctcctatgcctctagcgccccctgcagctcgggc
tcgctgccctctgaccgcatggatgtctgtctggggccagaggagcccactagccatggc
ccaggctgggggcgggcagacacggccatgcagactgagcctgacctggacagccgagtg
gaaacttggtgcagcgtaaggccgaccgtcatcctcagggacacggccatccgctcttct
acccgacaccttgattctgcactttcagagtctcccaagactgctctccttctggccctc
agccgacccagacctcccatcactcgatcccagagccacctgacactgtgggaggagaag
aaacaacggaagaaggagaagtcgggatcttctggggagaagggggccttgcagcgctcc
aagacgctgatgaacctcttcttcaagggagggcggcaggggcggccagcaggggacggg
cacagagaggcctggacactggacagcagaagccccaccaaagtccgccctcgcctggac
ctagagaaagcggggagtgtggggcctgtgcagaagtttgtcacctggagactaagacga
gaccgggagaggggccgggccctgctctccaccaggtctggaagcccctctggccaggca
cccactgtgaatgagcaggtgcaggcctgggaaagtcgacggcccctcattcaggacctg
gcccggaggctgctgacagatgatgaggtactagcagtcactcgccactgctcccggtat
gtccatgagggtggtgtggaggacctggtgcgccccctgctggccatcctggacaggccc
gcgaagctgctgttgctgagggatatcaggagcgtggtggcccccacagatctgggccgc
ttcgatagcatggtgatgcctgtggagctggaggcttttgaggctcttaagagcagggca
gtggggccttctgctttgagacctaccaggcaagacacgccacccaagcgtcatctcatc
acccctgtgcctgatagccgtgggggcttttacctgctaccagtgaacagctcagaggat
gaagacggagagataagggagaagcttggagtccttaaggtctccctcggtgcctctgct
cctcaccacaagggaatcccccctctacaagacgtgccagttgatgccttttcgcttcgc
cgaggcgcatgcgcacctcctccccagccacctcctgtggctccccgacctcccaggcct
aactggctactgacagaacccccaagcagagaggacactcagcagaaccaaagccagacc
ccagcccaaagctgcagccgcagtcgcagtcgcagccgcagccgcagccgcagtcgcagt
cgcagccgaggtcaaggcaagtctcctgggcgcaggcgctccccttccccggcacccatc
accactgctgccacagccaacgggcgttaccacaggcctcggaaagcaaggcctctgctt
ccacgacctctggatgggcaggtggccaaagtgggagccaggcaagggtccttggagaat
gggattggtcggatagctgaggaagcagtcgggaatgtctctacgggagcgctgaggacc
gtcacactatccaagatgaagcagtctttgggcattagcatctctgggggcatcgagtcc
aaggtgcagcccatggtgaagatagagaagatctttcccggaggtgcagctttcctctgc
gggaatctacaggctggctttgagctggtggcagtggatggcgaaagcctggaacaggta
acccaccagcgagcagtggacaccatccgcagggcttaccgaaacaaggctcgggaacct
atggaacttgtggtcagggtccctgggcctggcctgctgcccctagcctctgacctacga
gctgttaaggaccagagccttgctcctgacagtccctccacccatggacctgttgatgat
gctcggattcccacccagctacctccccctgaggctaggcaactccagcagtctctcagc
tcagccctaaaggtccctcaaagtatccctaaactctcccctatccttaagaatccccat
gacccttcctaa
DBGET
integrated database retrieval system
