Mycolicibacter hiberniae: MHIB_09180
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Entry
MHIB_09180 CDS
T06801
Name
(GenBank) hypothetical protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mhib
Mycolicibacter hiberniae
Pathway
mhib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHIB_09180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhib03019
]
MHIB_09180
03009 Ribosome biogenesis [BR:
mhib03009
]
MHIB_09180
Enzymes [BR:
mhib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MHIB_09180
Messenger RNA biogenesis [BR:
mhib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MHIB_09180
Ribosome biogenesis [BR:
mhib03009
]
Prokaryotic type
rRNA processing factors
MHIB_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
IF2_N
Motif
Other DBs
NCBI-ProteinID:
BBZ22500
UniProt:
A0A7I7WZK4
LinkDB
All DBs
Position
974935..978036
Genome browser
AA seq
1033 aa
AA seq
DB search
MAASQSRARGLEETYVVDPSLFRGPESAPSGPPAEHEDLPDRLRVHSLARVLGTTSRRVL
DALTELDGRTRSAHSSVDRVEAVRVRDLLGAAAEPASAGLFQQAGQAEAPDEVPDEPESR
LLLETAPEPVAVRADYMPLFVAPQPVAFERPVVPDDEDDDEDEDDLGGAEADADADADAE
DDSDDRPANRRRRRGRRGRGRGRGSEGAVAEEAEDDNDDEDPAVEAEESGDAEDATEEEE
EGGSAEEAGSRRRRRRRRRKTGAGEEEDTSSSDDPPNTVVHERAPRAKNGRTAKSERGTG
DDEIQGITGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERRMVVRDRIRTEP
PHPGARYTQIAVLEDGVMVEHFVTSAASTSLVGNVYLGIVQNVLPSMEAAFVDIGRGRNG
VLYAGEVNWEAAGLGGANRKIEQALKPGDYVVVQVSKDPIGHKGARLTTQISLAGRYLVY
VPGASSTGISRKLPDTERQRLKEILREVVPADAGVIIRTASEGVKEADIRADVERLQERW
TQIEATAAEVKQKAAGAAVALYEEPDVLVKVIRDLFNEDFTELVVSGDAAWDTINDYVGS
VAPELVPKLTRYQPPTGPDGQPGPDVFAVHRIDEQLAKALDRKVWLPSGGTLVIDRTEAM
TVVDVNTGKFTGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVIDFIDMVLESNRDL
VLRRLTEALGRDRTRHQVSEVTSLGLIQLTRKRLGTGLIEAFSTSCQHCAGRGIVLHADP
VDSAAPGRKAESGGTTSSRRSKRSKKPKVDEPAVAKVPVHTPGDHPMFKAMAAASDRHED
APDEDGAAPGADELAVDVTVQVEGDELAVDGEGAAVHVEPDADIVSEDGDETVEDLADEV
ADDDSDDDEVDDDEDSVESDEDESDEDESDEDESDEDDVEVDLDDDDDEDFDEDLDVIDD
ADESDDDDDDDDDDDDDDDDDDDDDDDDEDDSDEDDSDGDEDSEESVFEESEVPVVERPR
RRRAAARPAGPPM
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcgtcgcaatcacgcgcccgggggcttgaggagacgtacgtggtagacccttcc
ctttttagaggcccggaatccgcaccgtcgggaccgccggccgagcatgaggacttgccc
gatcgcctgcgcgtgcactcgctggcgcgggtgctcggcaccaccagccgccgggtgctg
gacgcattgaccgagctggacggccggacgcgcagtgcccactcgagcgtggaccgggtc
gaggccgtgcgggtccgcgaccttttgggtgcggccgccgaacccgcgtcggccggcttg
ttccagcaggccgggcaggccgaggcgcccgacgaggttccggacgagccggagtcccgg
ctgctgctggagaccgcacccgaacccgtggccgtccgcgccgactacatgccactgttc
gtagcgccgcaaccggttgccttcgagcgcccggtggtgcccgacgacgaggacgacgac
gaggacgaagacgatctcggtggcgctgaggccgacgccgacgccgacgccgacgccgag
gacgacagcgacgaccggcccgccaaccggcgccgccgacgtggccgccggggtcgcggc
aggggccgcgggtctgagggcgcggtcgctgaggaagccgaagacgacaacgacgacgag
gaccccgccgtagaagcggaggagtccggggacgccgaggacgccaccgaggaggaggag
gagggcggctcggccgaggaagccggcagccgtcgccgccgccgtcgccgtcgtcgcaag
acgggagccggcgaggaagaggacaccagctcctccgacgacccgcccaacaccgtcgtg
cacgaacgcgccccgcgtgccaagaacggccggaccgccaagagcgagcggggtaccggc
gacgacgagatccagggcatcaccggctccacacggctggaggccaagcggcagcgtcgc
cgcgacggccgcgacgccgggcgccgccgcccgccgatcctgagcgaagccgagttcctg
gcccgccgcgaggcggtggagcgcaggatggtggtgcgcgaccggatccggaccgagccg
ccgcatcccggtgcccgatacacccagatcgctgtgctcgaagacggcgtgatggtcgaa
catttcgtgacctctgcggcgtcgacctccttggtgggcaacgtctacctgggcattgtg
cagaatgtgctgccgtcgatggaggccgccttcgtcgacatcgggcggggccgcaacggc
gtgctctacgccggcgaggtgaactgggaagccgccgggctcgggggcgccaaccgcaag
atcgagcaggcgctcaaacccggcgactatgtcgtcgtgcaggtcagcaaagaccccatc
gggcacaagggcgcccggctgaccacccagatctcgctggccggccgctacctggtctat
gtcccgggtgcgtcgtcgaccggtatcagccgcaagctgcccgacaccgaacgtcagagg
ctcaaggagatcctgcgcgaggtggtgcctgccgacgccggcgtgatcatccgcaccgcc
tccgagggggtcaaggaagccgacatccgggccgacgtcgagcgcctgcaagagcgctgg
actcagatcgaggccaccgccgccgaggtcaagcagaaagcggccggcgccgccgtggcg
ctctacgaggagcccgacgtcctggtcaaggtgatccgggacctgttcaacgaggacttc
accgagctggtggtctccggggacgcggcctgggacacgatcaacgactatgtgggttcg
gtcgcccccgaactggtgcccaagctgacccgctatcagccacccaccggcccggacggt
caacccggtccagacgtgttcgctgtgcaccgcatcgacgaacagctggccaaggcgctg
gaccgtaaggtctggctgccctcgggcggcacgctggtgatcgaccggaccgaggcgatg
acggtggtcgacgtcaacaccggcaagttcaccggctccgggggcaacctcgaggagacg
gtgaccaagaacaacttggaggccgccgaggagatcgtgcggcagcttcgcctccgggac
atcggcggcatcatcgtcatcgacttcatcgacatggtgctggagtccaaccgggatctg
gtgctgcgccgtttgaccgaggcgctgggccgcgaccgaacccgccaccaggtctccgag
gtgacgtcgctgggcctgatccagctgacccgcaagcgcttgggcaccgggctcatcgag
gcattctcgacgtcgtgtcagcactgcgccggccgcggcatcgtgctgcacgccgacccg
gtggactcggccgcgccgggacgcaaggccgaatcgggcggtaccaccagcagccgccgc
agcaagcgctcgaagaagccgaaagtcgacgaaccggcagtcgccaaggtcccggtgcac
acccccggtgaccatccgatgttcaaggcgatggctgcggccagcgaccggcatgaggac
gcgccggacgaagacggtgcggcacccggcgccgatgagctggcggtggacgtcaccgtg
caggtcgagggagacgagctcgctgtcgacggcgagggcgccgcggtgcacgtggagccg
gacgccgacatcgtgtccgaggatggcgatgagacggtcgaggacctggccgacgaggtc
gccgacgacgactccgacgatgacgaagtcgatgatgacgaggacagcgtcgagtccgac
gaagacgagtccgacgaagacgagtccgacgaagacgagtccgacgaagacgatgtcgaa
gtcgatctcgacgacgatgacgacgaggacttcgacgaggacttggacgtaatcgatgac
gccgacgagtccgatgacgacgacgatgacgacgatgacgacgatgacgacgacgatgac
gacgatgacgacgatgacgacgacgaggatgactccgacgaggacgactctgacggcgat
gaggattccgaggagtcggtcttcgaggagtccgaggtgccggtggtcgagcgtccgcga
cggcgacgcgcggcagcccggccagcggggccaccgatgtaa
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