Microbulbifer sp. A4B17: BTJ40_08535
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Entry
BTJ40_08535 CDS
T05421
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mii
Microbulbifer sp. A4B17
Brite
KEGG Orthology (KO) [BR:
mii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mii03016
]
BTJ40_08535
Enzymes [BR:
mii01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
BTJ40_08535
Transfer RNA biogenesis [BR:
mii03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
BTJ40_08535
Prokaryotic type
tRNA splicing ligases
BTJ40_08535
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GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AWF80846
UniProt:
A0A2S1JR16
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All DBs
Position
1879179..1880387
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AA seq
402 aa
AA seq
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MPVKTVLNRNAPPGTVPVKIYTDDIEPKAMQQLKNIAQLPIVHSHVAAMPDVHLGKGATV
GSVIPTVSAIIPAAVGVDIGCGMNAVRTSLQVHQLPDNLKALRDAIEVKVPVGQGRHKLI
SARESACKLLAPGVDRLFSKHPGLLKKLHQPQKTWVTQMGTLGGGNHFIEICVDESGAVW
VMLHSGSRGIGNAIGQHFIQLARRDMAGHMHNLPDKDLAYFSEGCQNFDDYIEAVNWAQE
YARWNRQEMMKLVLGCLKASLPKFTLTTEAINCHHNYVVRERHFNRDVFVTRKGAISARN
DQLGIIPGSMGAKSFIVRGLGNKESFCSCAHGAGRKMSRSAARQRFSRKDLEDQTRGVQC
RKDNGVLDEIPAAYKDIDQVMENQSDLVDVVHTLRQVICIKG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaaaaacagtactaaatcggaatgcaccacctggcacggtaccggtaaaaatc
tataccgatgatatcgagcccaaggcgatgcaacagttaaagaatattgcccagcttcct
attgtgcattcccatgttgctgctatgccggatgtgcatttgggaaagggggcaacggta
ggatcggtgattccaacggtaagcgcgataattcccgctgctgttggggtggatattggt
tgtggaatgaatgcggtgcgaacttcgctacaggtccatcagctgccagacaatcttaaa
gcactgcgggatgccattgaggtgaaagtgccggttggtcagggacgacataaactgatc
agcgccagggaatctgcctgcaaacttttagctcccggtgtagatagattgttttccaag
catccagggcttctgaagaaactgcatcagccacaaaaaacctgggtgacccaaatgggt
acattagggggtggcaatcactttatcgaaatttgtgttgatgagagtggtgctgtatgg
gtgatgttgcattcgggaagtcgagggattggcaatgctattggccagcattttatccag
ctggcccgacgggatatggctgggcatatgcacaaccttccagataaggatctggcctat
ttttcagagggctgccagaattttgatgattatattgaggcggtcaattgggcgcaggaa
tatgctcgatggaacaggcaggaaatgatgaagctagtgctcgggtgtctgaaggcaagc
ttgccaaagtttactttgactacagaggcaatcaactgtcatcacaattatgttgttcgc
gagcgccattttaatagggatgtgttcgtaacacgcaaaggggcaataagtgcccggaat
gatcagctgggaattattcccggctcaatgggagctaaatcatttattgtccgagggctt
ggaaacaaggaatcattttgctcctgtgcccatggtgccgggcgtaaaatgagccgctca
gcggctcgtcagcgattttccagaaaggatttggaggatcagacacgaggtgtgcagtgc
cgtaaagataatggtgtattggatgagatccctgcagcttataaggacattgatcaggtg
atggaaaaccagtctgatctggtggatgtagtgcataccctgcgccaggtaatttgtatt
aagggatga
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